ggKbase home page

13_1_20cm_2_scaffold_5972_15

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 10986..12728

Top 3 Functional Annotations

Value Algorithm Source
Type IV-A pilus assembly ATPase PilB n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPT3_GEOS8 similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 569.0
  • Bit_score: 633
  • Evalue 1.70e-178
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 581.0
  • Bit_score: 993
  • Evalue 1.20e-286
type IV-A pilus assembly ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 569.0
  • Bit_score: 633
  • Evalue 4.90e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGCGCAGGCGCACCAAAAGCTGGGACAACCCGTCAACCGGCGGCTCGGAGACCTGCTCGTCGCCGATGGGCTTCTGACCCCGGCGCAGCTCCAGAAGGCCCTCGGCGAGCAGCGGGGTTCGACCGAGAAGCTCGGCTCGATTCTCATCAAGCTCGGCTTCATCAACGAGGAACAGCTGATCGGGTTCCTCTCCCGCCAGTACGGCGTGCCCTCGATCACGCTCGCCCAGCTCGAGATCGATCCCGCGGTCCTCCGCCTGGTGCCGGCGCCGACCGCGAGGAAGTACGAGGTCATCCCGGTCCGGAAAATGGGCAACTCGCTGGCCGTCGCGATGGCCGACCCGACGAACGTCTTCGCCCTCGACGACATCGCGTTCATGACGAACCTCCAGGTGCTGCCGCTCGTCGCGTCGCAGACGGCGATCCGGAAGGCGATCGACCGCAACTACCAGTCGAAGACCGAGGCGATCGCGAGCGTCATGCAGGACATCTCCTCGGACCTCGCGAACATCGAGGTCGTCGAGGGCGAGGAGGACACCGGCAGCAAGGTCGACGTCTTCGAGCTGAAGGAGTCGGCCGACGAGGCGCCCGTCGTCAAGCTCGTGAACATGGTGCTCGTCGACGCGATCCAGAAGGGTGCCTCGGACGTTCACTTCGAGACGTACGAGAAGGTGTTCCGGATTCGCTTCCGGATGGACGGCGTGCTGCACGAGATGCTCTCCCCACCCAAGCGCCTCGAGTCGGCGATCCTGTCGCGCCTTAAGATCATGTCGAACCTCGACATCGCCGAGCGGCGCCTGCCACAGGACGGGCGGATCAAGCTCAGGTACACGGGCCGCGAGATCGACTTCCGCGTCTCGACCTTACCGACGATCTTCGGCGAGAAGGCGGTCCTCCGCATCCTCGACAAGGACGCGCTGCAGCTCGACCTCACCAAGCTCGGATTCGATCCGTGGAGCCTCGAGAAGTTCAACGCCGTGATCCACCAGCCCTACGGCATGGTCCTCATCACCGGGCCCACCGGCTCGGGGAAGACGACGACCCTCTACTCGGCGATCCACACGATCAACTCGCCGGACGTCAACATCATGACCGCCGAGGACCCGGTCGAGTACAACCTCAAGGGCGTCAACCAGGTGCAGATCAACGAGAGCGTGGGGCGGACCTTCGCCGCCGCGCTCCGCTCGTTCCTGCGCCAGGACCCGGACGTGATCCTGGTCGGCGAGACGCGCGATCTCGAGACGGCGCAGATCTCGATCCGCGCCGCGCTCACCGGCCACCTCGTCTTCACCACGCTCCACACGAACGACTGCCCCTCGACCGTCGCGCGGCTCCTGGACATGGGAATCCCGCCGTTCCTCGTCTCGTCCTCGCTCCTGCTGATCCTGGCCCAACGTCTCGGACGCAAGGTGTGCAGCGCGTGCCGGGAGCCCTACGAGGTCGACCAGCAGACGCTCGTCCCCTACGGCCACACCGCGACCGGGCACGGCAAGGTCACGCTCTACAAGGGCAAGGGCTGCCCGACGTGCAGCTTCACGGGCATGAAGGGGCGGGTGGCGATCTACGAGACCATGCCGATCAGCGAGGAGCTCCGGGACGGGATCCTCCGGAGCGCGACGGCCGCGGAGCTCCAGGAGATCGCGAAGTCGCAGGGCATGAAGACCCTGCGGCAGTCCGGCCTCTTGAAGGTACTCGATGGGACGACGACCATCGAAGAGGTGCTGAGAGTCACGCTCGCCTAG
PROTEIN sequence
Length: 581
MAQAHQKLGQPVNRRLGDLLVADGLLTPAQLQKALGEQRGSTEKLGSILIKLGFINEEQLIGFLSRQYGVPSITLAQLEIDPAVLRLVPAPTARKYEVIPVRKMGNSLAVAMADPTNVFALDDIAFMTNLQVLPLVASQTAIRKAIDRNYQSKTEAIASVMQDISSDLANIEVVEGEEDTGSKVDVFELKESADEAPVVKLVNMVLVDAIQKGASDVHFETYEKVFRIRFRMDGVLHEMLSPPKRLESAILSRLKIMSNLDIAERRLPQDGRIKLRYTGREIDFRVSTLPTIFGEKAVLRILDKDALQLDLTKLGFDPWSLEKFNAVIHQPYGMVLITGPTGSGKTTTLYSAIHTINSPDVNIMTAEDPVEYNLKGVNQVQINESVGRTFAAALRSFLRQDPDVILVGETRDLETAQISIRAALTGHLVFTTLHTNDCPSTVARLLDMGIPPFLVSSSLLLILAQRLGRKVCSACREPYEVDQQTLVPYGHTATGHGKVTLYKGKGCPTCSFTGMKGRVAIYETMPISEELRDGILRSATAAELQEIAKSQGMKTLRQSGLLKVLDGTTTIEEVLRVTLA*