ggKbase home page

13_1_40cm_2_scaffold_15739_9

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: comp(5086..5931)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 278.0
  • Bit_score: 240
  • Evalue 2.20e-60
Diaminopimelate epimerase id=4873761 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 272.0
  • Bit_score: 231
  • Evalue 9.50e-58
diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 276.0
  • Bit_score: 229
  • Evalue 1.00e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 846
ATGACGCCTCCGCAGATCGAGTTTTTCAAGATGTCGGCGGCCGGCAACGACTTCATCCTGTTCGACAATCGTTCCGGGACGCTGAGGCGCGACGATTTTCCGGACCTGGTGCGGCGCCTCTGCACGCGTGCGCTGTCGGTGGGCGCCGACGGAGTCATCCTGCTGGGGTCGTCGACGGTCGCGCATGTGCGCGTCTCCTTCTTCAATCCCGACGGTGCGCCGACCTTCTGCGGCAACGGCGCGCGTTGCGCCAGCAGGCTGGCATACCTGCAGGGGATCGCTCCAGCGCGCATGACGGTCGAGACCGCCGTCATGGTGCACCGCGCCGAGGTGAAGGGCGCTCTCGTCTCGTTCGAGATGCGCGACCCGCAGGGCTTCGACGATGCGGTGGAGGTCCGGACGGGGAACGAGACGATCCGCGGTTCCTTCGTCGATACCGGGGTCCCGCACTTCGTGGTGTTCCGGGCGATTCCCGATCATGATTCGATTCACGACCTGGGTCGGGTCCTGCGCATGCATCCGCGCTTCGCGCCCTCGGGCACGAACGTCAATTTCGTCGAGCCAGGTGGCGACGGTGTTCTCGCCATCCGCACCTACGAGCGCGGGGTGGAAGGGGAGACCCTCGCCTGCGGCACCGGCTGCGTCGCGGCGGCGATCGCCGCGGTCGCTTCGGGCAAGGCCGAAGCGCCGGTGTCGCTCCGGACGCGTTCGGGCGCCCTCGTCCGCGTGCGCTTCGAGGGGCCGCCAAAGAGGGCCTCCGGCGTGCGGCTCGAGGGGGAGGCCCGGCTGGTCTACGTCGGGCAGCTCACCGAGGAAGCGACGCAGGGATTTCAGCCCAGAACCTGA
PROTEIN sequence
Length: 282
MTPPQIEFFKMSAAGNDFILFDNRSGTLRRDDFPDLVRRLCTRALSVGADGVILLGSSTVAHVRVSFFNPDGAPTFCGNGARCASRLAYLQGIAPARMTVETAVMVHRAEVKGALVSFEMRDPQGFDDAVEVRTGNETIRGSFVDTGVPHFVVFRAIPDHDSIHDLGRVLRMHPRFAPSGTNVNFVEPGGDGVLAIRTYERGVEGETLACGTGCVAAAIAAVASGKAEAPVSLRTRSGALVRVRFEGPPKRASGVRLEGEARLVYVGQLTEEATQGFQPRT*