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13_1_40cm_2_scaffold_6132_14

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: comp(14975..15559)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2260595 bin=GWB2_CP_45_9 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 174.0
  • Bit_score: 130
  • Evalue 2.10e-27
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 126
  • Evalue 1.10e-26
RNA polymerase sigma-E factor {ECO:0000313|EMBL:AGC48640.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 126
  • Evalue 5.50e-26

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Taxonomy

Myxococcus stipitatus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCCGGCGAGCCCACGGATGTCGATCTGATCCGTGAGGTGCTGGCGGGCCGGGTCGAGCGGTTCGAGATCCTCGTCCACCGGTACCAGCGCCTGGTGGCGACCGCCGCCCTGCGCATGGGCACCCCCCGCGAGGAGGTCGAAGACGTGAGCAGCGAGGTCTTCTACAAGGTGTACAGGAGCCTGGGCCGCTATCGCCCCGAGCACGCCCTCTCCACCTGGCTCTACCGCATCACCGTCAACGCCGCCCTCGACCGCAAGAGGAGCACGCGCCACGAAAGCCACATGGAGGAGCTCTCCCCCACCCTGGCCGACGGACGACGGTCCGTCCATGAGGTCGCCAGCGACAGAGAGCGCGCCCGGCTCCTGCAGGAGGCCCTCGAACGGATTCCCGGGCACTACCGTTCTCCCCTCGTCCTGGCGCACATCGAGGGGCTTCCTCTGGAGGAAATCGCCCGCATTCTCGACCTTCCCGAGGGGACGGTCAAATCGAGGCTGTTCCGGGCCCGCGCCATGCTCAAGGAGATCATCCGGCGCCATTACCCCTCCCTCGCCCCGCAGGGCGCCCTGGAGAGCGCGTCATGA
PROTEIN sequence
Length: 195
MAGEPTDVDLIREVLAGRVERFEILVHRYQRLVATAALRMGTPREEVEDVSSEVFYKVYRSLGRYRPEHALSTWLYRITVNAALDRKRSTRHESHMEELSPTLADGRRSVHEVASDRERARLLQEALERIPGHYRSPLVLAHIEGLPLEEIARILDLPEGTVKSRLFRARAMLKEIIRRHYPSLAPQGALESAS*