ggKbase home page

13_1_20cm_2_scaffold_175_15

Organism: 13_1_20CM_2_Acidobacteria_65_9

partial RP 12 / 55 MC: 1 BSCG 12 / 51 ASCG 7 / 38
Location: comp(15611..16354)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 249.0
  • Bit_score: 363
  • Evalue 2.60e-97
Pseudouridine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKC7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 254.0
  • Bit_score: 165
  • Evalue 9.50e-38
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 244.0
  • Bit_score: 157
  • Evalue 5.70e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGATCGGCCCGGCACGGCGAAGCGCCGCGCCACGCTCGGCGACGAACGCGACCTGCCGATCCTCTACGAAGACGACGCGCTCATCGTGCTGAACAAACCGGCAGGCGTGCTCGCGGTGCCGCTCGAGCGGCGCGAGGGCGCGCGATCGGTGTTCGAAGATCTGAAGGCCTATCTGAAAACGCGGCGCAAGCCGCGACCGTTCGTCGTCCATCGCATCGACCGCGACACGTCCGGCCTCGTCGTCTTCGCGAAGACCGCGGCGTCGCAGGCGCAGCTCAAGGAACAGTTCAAGCGTCACCGCGCCGAGCGCGTGTATCGCGCGCTCGTGTACGGGCAGCCGAATCCCGCGTCCGGGATATGGCGCGATCGCCTCGTGTGGGATACGAAGGCACTGATTCAGAAGGAAACGCATCCGCGGGATCCGCGCGGCAAGGACGCGATCTGTCACTACCGCCTCGTCGAGCCGCTGGGACGCGCGTCGCTCATCGAGGTGACGCTCGTCACGGGACGGCGAAATCAGATCCGCATCCAGGCGCGCTTACGCGGCCACACGCTGGTCGGCGAGCAGCGCTACACGTACGGGCCCGACACGCTGCGTCCCATCGCATTTCCGCGTCAGGCGCTGCACGCCTTCCGGCTGACGTTCTTGCATCCTGCTGACGGCCGCGAGCTGCGGTTCGAAGCGCCGCTCCCGGACGACATGAACCGCCTCGTCGCGCAGCTGCGCCGCAGCCACGGGTAA
PROTEIN sequence
Length: 248
MDRPGTAKRRATLGDERDLPILYEDDALIVLNKPAGVLAVPLERREGARSVFEDLKAYLKTRRKPRPFVVHRIDRDTSGLVVFAKTAASQAQLKEQFKRHRAERVYRALVYGQPNPASGIWRDRLVWDTKALIQKETHPRDPRGKDAICHYRLVEPLGRASLIEVTLVTGRRNQIRIQARLRGHTLVGEQRYTYGPDTLRPIAFPRQALHAFRLTFLHPADGRELRFEAPLPDDMNRLVAQLRRSHG*