ggKbase home page

13_1_20cm_2_scaffold_2612_4

Organism: 13_1_20CM_2_Acidobacteria_65_9

partial RP 12 / 55 MC: 1 BSCG 12 / 51 ASCG 7 / 38
Location: comp(2023..2466)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003701EF0 similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 140.0
  • Bit_score: 135
  • Evalue 3.70e-29
MerR family transcriptional regulator {ECO:0000313|EMBL:KJK59385.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 143.0
  • Bit_score: 123
  • Evalue 2.10e-25
DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 141.0
  • Bit_score: 119
  • Evalue 1.00e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGTCAACCCACCTCTATACGGCAGACGAGGTCGCAGAGCTCCTGAACCTCCACGTCAAAACGATTCGCCGCTATGTCCGTGACGGGCGGCTGAAGGCGAGGCGCATCGGCAAGGAGTACCGGATCGCCCGATCCGATCTCGATGAATTCGCTGGCGAGACTCGCGCCGCCGATACACCAGTGGCTCGAACGCGGCATGTCATCGCGTCGAGCATCGTCGACGTCGATGTGATCAGCCCGGACGAAAGTCATCGCATCACCACGATGGTCATGGCGTCGCTGAACGCGAGAAAGGGAGAAGCTGATTTCCCCAGGGTGGACAGCATCTACTACCCGGAGCAGGCCAAGCTGCGGATCACGATCACCGCGAGCCCGATGTTGACCTGCGAGTTGCTTCGAATGATCAACGCGCTCCTGGAGAGTGGCCGTGGCGAGCATCTATAA
PROTEIN sequence
Length: 148
MSTHLYTADEVAELLNLHVKTIRRYVRDGRLKARRIGKEYRIARSDLDEFAGETRAADTPVARTRHVIASSIVDVDVISPDESHRITTMVMASLNARKGEADFPRVDSIYYPEQAKLRITITASPMLTCELLRMINALLESGRGEHL*