ggKbase home page

13_1_40cm_3_scaffold_2405_22

Organism: 13_1_40CM_3_Acidobacteria_55_5

partial RP 16 / 55 MC: 1 BSCG 14 / 51 ASCG 8 / 38 MC: 1
Location: comp(18709..19425)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:ABF39143.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABF39143.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 252.0
  • Bit_score: 225
  • Evalue 8.10e-56
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF7_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 252.0
  • Bit_score: 225
  • Evalue 5.80e-56
(uracil-5)-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 252.0
  • Bit_score: 225
  • Evalue 1.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Koribacter versatilis → Candidatus Koribacter → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 717
AATGCTGAGGACACGGAACTTTTGATCGAGGCTCACTGCACACCGAGCATTGAGAAAGGCGCCGCAGAGCAGTGGGCACAAGAAGCGCGGCAAGTACTGCCAGAAATTGCCGGGGCTGTTGTCTTCATCGCGAGGAACACACTTCAGCCTGAGTTGTGGATTGTGGCCGGCGCGAAGGAGATTACTTACAACACTGCGTACGGGTCGTATCGAGTAAGCGCTGGGGCGTTTTTTCAGGTGAACCGTCACCTCACGGATGAGCTTGTGAGAGTCGTGACCGAAGGACGTTCGGGAACCACAGCATTGGATTTGTACGCCGGCGTCGGATTGTTTTCTGCGGTTCTGAATCGGGAATTCGAGCGCGTGATTGCGGTGGAGTCGTCACCGACTTCTTATGCGGACCTGCTATACAATTCGACTGCGAACGTAAAAGGTGTGCGTGCGACTGTGGAGCAGTATCTGGAAAACGCAGGCGGCAAGTTGCATCCCGATTTTGTGGTGGTGGATCCGCCGAGGGCCGGGCTCAACGAAGGTGTGATCCGAAATCTGGTGAAGCTGGCGGCTCCACGCATTACCTACGTGTCGTGCGATCCGGCGACGCTCGCGCGAGACCTGAGGGCGCTGTTGCAGTCGGGCTATCGCGTGGAGCAGGCACACCTGGTAGATCTCTTCCCCCAAACCTACCATCTGGAAAGCGTATTTCATCTCGTCCGCTAG
PROTEIN sequence
Length: 239
NAEDTELLIEAHCTPSIEKGAAEQWAQEARQVLPEIAGAVVFIARNTLQPELWIVAGAKEITYNTAYGSYRVSAGAFFQVNRHLTDELVRVVTEGRSGTTALDLYAGVGLFSAVLNREFERVIAVESSPTSYADLLYNSTANVKGVRATVEQYLENAGGKLHPDFVVVDPPRAGLNEGVIRNLVKLAAPRITYVSCDPATLARDLRALLQSGYRVEQAHLVDLFPQTYHLESVFHLVR*