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13_1_40cm_3_scaffold_3144

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3144_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1502)
DNA (1500bp) protein (500aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6R6_ACISM
peptidase M14, carboxypeptidase A Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
13_1_40cm_3_scaffold_3144_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1505..3613)
DNA (2109bp) protein (703aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A855_GEMAT
putative S9C family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative S9C family peptidase
13_1_40cm_3_scaffold_3144_3
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

comp(3695..5323)
DNA (1629bp) protein (543aa)
cell envelope biogenesis protein OmpA n=1 Tax=Leucothrix mucor RepID=UPI0003B752B2
OmpA family protein {ECO:0000313|EMBL:ABU45468.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 /
transmembrane protein
13_1_40cm_3_scaffold_3144_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5339..5668)
DNA (330bp) protein (110aa)
Outer membrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG49_THIDA
ompA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane protein
13_1_40cm_3_scaffold_3144_5
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5653..6738)
DNA (1086bp) protein (362aa)
OmpA domain protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JEY0_9BACT id=5225687 bin=16ft_combo_ws3_JS1 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ompa/motb domain-containing protein
OmpA/MotB domain-containing protein Tax=GWC2_Geobacteraceae_55_20_curated
13_1_40cm_3_scaffold_3144_6
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

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comp(6787..8160)
DNA (1374bp) protein (458aa)
Predicted protein id=4815881 bin=GWA2_Elusi_like_61_42 species=Chlamydomonas reinhardtii genus=Chlamydomonas taxon_order=Chlamydomonadales taxon_class=Chlorophyceae phylum=Chlorophyta tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein Tax=GWA2_Elusimicrobia_61_42_curated
13_1_40cm_3_scaffold_3144_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8261..10381)
DNA (2121bp) protein (707aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0C2_9BACT
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis sensory transducer
13_1_40cm_3_scaffold_3144_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10680..11747
DNA (1068bp) protein (356aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase id=2725411 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_3_scaffold_3144_9

Not on your lists

12000..14072
DNA (2073bp) protein (691aa)
Putative helicase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR3_9BACT
Putative helicase {ECO:0000313|EMBL:AAY89249.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
helicase, DEAD/DEAH family
13_1_40cm_3_scaffold_3144_10

Not on your lists

14463..14888
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHN97945.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
13_1_40cm_3_scaffold_3144_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14909..15358
DNA (450bp) protein (150aa)
hypothetical protein; K12073 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
thioesterase superfamily protein
13_1_40cm_3_scaffold_3144_12
unknown

Not on your lists

15433..15843
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_3_scaffold_3144_13
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15840..16211
DNA (372bp) protein (124aa)
Oxidoreductase {ECO:0000313|EMBL:KKB80858.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Uncharacterized protein id=3680151 bin=GWA2_Elusimicrobia_69_24 species=Coccomyxa subellipsoidea genus=Coccomyxa taxon_order=unknown taxon_class=Trebouxiophyceae phylum=Chlorophyta tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Gfo/Idh/MocA family oxidoreductase
13_1_40cm_3_scaffold_3144_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16151..16864
DNA (714bp) protein (238aa)
Oxidoreductase domain protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFH4_9CHLR
Predicted dehydrogenase {ECO:0000313|EMBL:CDM66525.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Gfo/Idh/MocA family oxidoreductase
13_1_40cm_3_scaffold_3144_15

Not on your lists

16870..18090
DNA (1221bp) protein (407aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR7_9BACT
hydroxymethylbutenyl pyrophosphate reductase
13_1_40cm_3_scaffold_3144_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

18118..20250
DNA (2133bp) protein (711aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/DEAH box helicase
Displaying 16 items

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