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13_1_40cm_3_scaffold_368

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_368_1
unknown

Not on your lists

comp(1..189)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_368_2
unknown

Not on your lists

422..907
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

13_1_40cm_3_scaffold_368_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1172..2488)
-----------------
DNA (1317bp)
protein (439aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365E1F3
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_3_scaffold_368_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2601..2813
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLL4_BLASD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_368_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2814..3098
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9F7_ANAD2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_368_6
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3111..4043
-----------------
DNA (933bp)
protein (311aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9806 RepID=I4GV45_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI13669.1}; TaxID=1160282 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9806.;"
hypothetical protein
13_1_40cm_3_scaffold_368_7
unknown

Not on your lists

comp(4221..5801)
-----------------
DNA (1581bp)
protein (527aa)

This feature has no annotations

13_1_40cm_3_scaffold_368_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(5830..9090)
-----------------
DNA (3261bp)
protein (1087aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Uncharacterized protein id=2477141 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_368_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9179..10111)
-----------------
DNA (933bp)
protein (311aa)
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:CDM66400.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
Histone deacetylase id=4795182 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes rbh
deacetylase
13_1_40cm_3_scaffold_368_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10135..11187)
-----------------
DNA (1053bp)
protein (351aa)
Molybdate ABC transporter, ATPase subunit n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK50_RHOM4
Molybdenum ABC transporter ATPase {ECO:0000313|EMBL:KFA90526.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;"
molybdate ABC transporter ATPase
13_1_40cm_3_scaffold_368_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11153..11824)
-----------------
DNA (672bp)
protein (224aa)
Molybdate ABC transporter, permease protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHV6_9BACT
modB; molybdate ABC transporter permease protein; K02018 molybdate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
modB; molybdate ABC transporter permease protein
13_1_40cm_3_scaffold_368_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(11856..12605)
-----------------
DNA (750bp)
protein (250aa)
Molybdate ABC transporter, periplasmic binding protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHV9_9BACT
modA; molybdate ABC transporter periplasmic binding protein; K02020 molybdate transport system substrate-binding protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
modA; molybdate ABC transporter periplasmic binding protein
13_1_40cm_3_scaffold_368_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(12602..13864)
-----------------
DNA (1263bp)
protein (421aa)
Dicarboxylate carrier MatC domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP25_9FIRM rbh
di-/tricarboxylate transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
di-/tricarboxylate transporter
13_1_40cm_3_scaffold_368_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13996..16281
-----------------
DNA (2286bp)
protein (762aa)
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] Tax=GWD2_Deltaproteobacteria_55_8_curated
Nitrite and sulphite reductase 4Fe-4S region id=1883724 bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrite and sulfite reductase 4Fe-4S region
13_1_40cm_3_scaffold_368_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16281..16814
-----------------
DNA (534bp)
protein (178aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
id=1883725 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_368_16
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16798..17637)
-----------------
DNA (840bp)
protein (280aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKF3_METS4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA20286.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_1_40cm_3_scaffold_368_17
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(17802..18659)
-----------------
DNA (858bp)
protein (286aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N035_ANATU
Prephenate dehydratase Tax=S_OP1_64_32
13_1_40cm_3_scaffold_368_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18708..19523
-----------------
DNA (816bp)
protein (272aa)
Putative Sulfite/ferredoxin reductase (CysI) id=4894274 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase Tax=GWA2_Rokubacteria_73_35_curated
uroporphyrinogen III synthase HEM4
13_1_40cm_3_scaffold_368_19
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

19526..20176
-----------------
DNA (651bp)
protein (217aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=GWC2_SYX_53_9_curated
Siroheme synthase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DWY6_9FIRM
siroheme synthase
13_1_40cm_3_scaffold_368_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20173..20943
-----------------
DNA (771bp)
protein (257aa)
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3L6_PELTS
uroporphyrinogen-III methylase and uroporphyrinogen-III synthase
13_1_40cm_3_scaffold_368_21
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

20940..21857
-----------------
DNA (918bp)
protein (306aa)
Threonine ammonia-lyase, medium form {ECO:0000313|EMBL:AKG92039.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AKG92039.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglob
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HFN6_9BACL
13_1_40cm_3_scaffold_368_22
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21911..23590
-----------------
DNA (1680bp)
protein (560aa)
glutaminyl-tRNA synthetase; K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] Tax=RBG_13_Deltaproteobacteria_60_28_curated
Glutamine--tRNA ligase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP35_SYNFM
glutaminyl-tRNA synthetase
13_1_40cm_3_scaffold_368_23
unknown

Not on your lists

23594..24031
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

Displaying 23 items

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