ggKbase home page

13_1_40cm_3_scaffold_1375_17

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: 17853..18173

Top 3 Functional Annotations

Value Algorithm Source
fumA; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha; K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=RBG_16_Caldithrix_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 97.0
  • Bit_score: 116
  • Evalue 1.80e-23
fumarase (EC:4.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 97.0
  • Bit_score: 79
  • Evalue 6.40e-13
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit id=3536888 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 89.0
  • Bit_score: 81
  • Evalue 7.90e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Caldithrix_48_16_curated → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 321
ATGATAGAGTGTCGTTTCGGAGCGTGTATGAATCGCAAATTTTTCCATGACAACATTCTGGAACTTATTCGCCGGACTTCAGCGTTTCTTCCACCAGACGTCGAGAATGTCATTAACCTTCAACGGAAGCTCGAAGCGTCCGGGTCTAAGGCCAACTTTGCATTGGAGTTGGTCGCCCAGAACATCGGCTTGGCGAAGGCCCGTTCGCTCCCGATTTGCCAGGATACCGGGACGATCAATTTTTACTTCGAAACTCCGCGCGGGGTGGATCAACTGGAGCTCGAAGAGCTTTGTTGCGATGCCGTCAGGGAAGCCACATAA
PROTEIN sequence
Length: 107
MIECRFGACMNRKFFHDNILELIRRTSAFLPPDVENVINLQRKLEASGSKANFALELVAQNIGLAKARSLPICQDTGTINFYFETPRGVDQLELEELCCDAVREAT*