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13_1_40cm_3_scaffold_849

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_849_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2..1873
DNA (1872bp) protein (624aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Euryarchaeota_68_12_curated
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EB389
13_1_40cm_3_scaffold_849_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1870..4659
DNA (2790bp) protein (930aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D6AD8 rbh
13_1_40cm_3_scaffold_849_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4662..6176
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364B1D3
DNA-directed RNA polymerase subunit A'' Tax=RBG_16_Euryarchaeota_68_13_curated
DNA-directed RNA polymerase subunit A''
13_1_40cm_3_scaffold_849_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6173..6448
DNA (276bp) protein (92aa)
Ribosomal protein L30E n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YMW8_9EURY
Ribosomal protein L30E Tax=RBG_16_Euryarchaeota_68_12_curated
Ribosomal protein L30E
13_1_40cm_3_scaffold_849_5
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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6965..8401
DNA (1437bp) protein (479aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0Q6_THEPD rbh
Uncharacterized protein {ECO:0000313|EMBL:AKG39328.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
major facilitator transporter
13_1_40cm_3_scaffold_849_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

8686..10530
DNA (1845bp) protein (615aa)
yqhH; ATP-dependent helicase YqhH (EC:3.6.4.-) Tax=RBG_16_Euryarchaeota_68_13_curated
yqhH; ATP-dependent helicase YqhH (EC:3.6.4.-)
ATP-dependent helicase YqhH n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LWB7_THEPS rbh
13_1_40cm_3_scaffold_849_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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10527..11999
DNA (1473bp) protein (491aa)
Restriction endonuclease protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CW05_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_849_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(11996..13066)
DNA (1071bp) protein (357aa)
Radical SAM domain protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9F0_ACIB4 rbh
Radical SAM domain protein; K07129 Tax=RBG_16_Euryarchaeota_68_12_curated
Radical SAM domain protein
13_1_40cm_3_scaffold_849_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13137..14963
DNA (1827bp) protein (609aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_849_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15017..15310)
DNA (294bp) protein (98aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_849_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


15394..16203
DNA (810bp) protein (270aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Euryarchaeota_68_12_curated
rsmA; putative ribosomal RNA small subunit methyltransferase A (EC:2.1.1.-)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365CD3F
13_1_40cm_3_scaffold_849_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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16249..17121
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKN2_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_849_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17118..18200
DNA (1083bp) protein (361aa)
nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000373D5F9
nucleoside-diphosphate-sugar pyrophosphorylase
13_1_40cm_3_scaffold_849_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18219..19541)
DNA (1323bp) protein (441aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] id=14630643 bin=bin9_gal15 species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
imidazolonepropionase
13_1_40cm_3_scaffold_849_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(19538..20464)
DNA (927bp) protein (309aa)
Mevalonate kinase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP59_ACIS0
mevalonate kinase Tax=RBG_16_Euryarchaeota_68_12_curated
mevalonate kinase
13_1_40cm_3_scaffold_849_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20579..20821
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_849_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20914..21921)
DNA (1008bp) protein (336aa)
ATPase AAA (EC:3.6.4.3 3.6.1.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAE0_ACIB4
AAA family ATPase, CDC48 subfamily Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_849_18

Not on your lists

22137..22298
DNA (162bp) protein (54aa)
Aspartate-semialdehyde dehydrogenase (Asd) {ECO:0000313|EMBL:AIF15374.1}; EC=1.2.1.11 {ECO:0000313|EMBL:AIF15374.1};; TaxID=1456250 species="Archaea; Thaumarchaeota; environmental samples.;" source="u
Uncharacterized protein n=1 Tax=Oryza brachyantha RepID=J3MSY4_ORYBR
13_1_40cm_3_scaffold_849_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23116..23634)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LH43_THEBM
hypothetical protein; K13993 HSP20 family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_849_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

23843..24388
DNA (546bp) protein (182aa)
ZPR1-related zinc finger protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B938_METTP
ZPR1-related zinc finger protein Tax=RBG_16_Euryarchaeota_68_12_curated
ZPR1-related zinc finger protein
13_1_40cm_3_scaffold_849_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(24339..24545)
DNA (207bp) protein (69aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6); K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_16_Euryarchaeota_68_12_curated
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365CFE8
13_1_40cm_3_scaffold_849_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(24550..25221)
DNA (672bp) protein (224aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7T8_9EURY
putative transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
putative transcriptional regulator
13_1_40cm_3_scaffold_849_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

25656..26288
DNA (633bp) protein (211aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_849_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

26291..27001
DNA (711bp) protein (237aa)
RecA superfamily ATPase implicated in signal transduction n=2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V2A5_PYRAB
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
ATPase
13_1_40cm_3_scaffold_849_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

27003..28685
DNA (1683bp) protein (561aa)
Putative circadian clock protein, KaiC n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDI1_PYRF1
RecA family AAA ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative circadian clock protein KaiC
Displaying 25 items

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