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13_1_40cm_3_scaffold_5926

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5926_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..428)
DNA (426bp) protein (142aa)
Beta-lactamase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QP24_9DELT
beta-lactamase class A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
beta-lactamase
13_1_40cm_3_scaffold_5926_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

491..4099
DNA (3609bp) protein (1203aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
13_1_40cm_3_scaffold_5926_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4153..4887
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000369F440
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_5926_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4888..5463
DNA (576bp) protein (192aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S9_GEMAT
hypothetical membrane protein; K02221 YggT family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function YGGT
13_1_40cm_3_scaffold_5926_5
unknown

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5483..5635
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_3_scaffold_5926_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5580..5990)
DNA (411bp) protein (137aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_5926_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5930..6532)
DNA (603bp) protein (201aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_5926_8
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6529..7029)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036132B2
RNA polymerase sigma factor Tax=RBG_13_Deltaproteobacteria_61_14_curated
RNA polymerase sigma factor RpoE
13_1_40cm_3_scaffold_5926_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7221..8999
DNA (1779bp) protein (593aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cura
methionine synthase I/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10)
Methylenetetrahydrofolate reductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHT4_CHLTF
13_1_40cm_3_scaffold_5926_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9129..9401)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0003193B38
transposase IS200-family protein; K07491 putative transposase Tax=GWC2_Gemmatimonadetes_71_10_curated
transposase IS200
13_1_40cm_3_scaffold_5926_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9828..10346
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035FC05B
protein of unknown function DUF664
Uncharacterized protein {ECO:0000313|EMBL:AHG93073.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_5926_12
unknown

Not on your lists

10361..10801
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_3_scaffold_5926_13
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10935..11315)
DNA (381bp) protein (127aa)
Transposase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EN24_9CHLR
Transposase {ECO:0000313|EMBL:AKI03359.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
13_1_40cm_3_scaffold_5926_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11726..11977
DNA (252bp) protein (84aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=GWC2_Gemmatimonadetes_71_10_curated
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
13_1_40cm_3_scaffold_5926_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11987..12295
DNA (309bp) protein (103aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=GWC2_Gemmatimonadetes_71_10_curated
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
Displaying 15 items

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