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13_1_40cm_3_scaffold_1653_9

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: 14617..15066

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis ATPase PilB n=4 Tax=Geobacter RepID=Q39VU7_GEOMG id=5224980 bin=16ft_combo_ws3_JS1 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 152.0
  • Bit_score: 178
  • Evalue 6.70e-42
pilB; type IV pilus biogenesis protein PilB; K02652 type IV pilus assembly protein PilB Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 152.0
  • Bit_score: 230
  • Evalue 1.20e-57
pilF; type IV pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 153.0
  • Bit_score: 176
  • Evalue 7.10e-42

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 450
GTGCTGTCGACGCTGCACACCAATGACGCCCCGTCCACGGTGACGCGCATGGTGGACATGGGGATCGAGCCGTTCAACGTGGCGAGCGCGGTGAACCTGATCGTCGCGCAGCGCCTGGTGCGGCGCATCTGCTCCAGCTGCAAGCAACAGCACGAGTACTCGGACGAAGAGCTGCACGCCTTCGGCATCCACCGCAGCGATGGCCCGTTCTTCAAGGGCCAGGGGTGCGACACCTGCAACGGCACGGGGTACAAGGGCCGGCAGGGGCTCTACGAGGTGATGTCGATGTCGAGCGCGGTCCGGCGCCTGGTGCTGAAGGGCGCCTCGACCGAAGAGCTGCGGGACCAGGGCGTCAAGGACGGGATGCTGACGCTGCGCATGGATGGAATGGTGAAGATCAAAAAGGGGGTCACGACCCTCGAAGAGGTCGTGAAGGAAACGGCCGCGTGA
PROTEIN sequence
Length: 150
VLSTLHTNDAPSTVTRMVDMGIEPFNVASAVNLIVAQRLVRRICSSCKQQHEYSDEELHAFGIHRSDGPFFKGQGCDTCNGTGYKGRQGLYEVMSMSSAVRRLVLKGASTEELRDQGVKDGMLTLRMDGMVKIKKGVTTLEEVVKETAA*