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13_1_40cm_3_scaffold_1653_11

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: 16243..17442

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 399.0
  • Bit_score: 547
  • Evalue 1.10e-152
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 384.0
  • Bit_score: 614
  • Evalue 8.00e-173
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 399.0
  • Bit_score: 552
  • Evalue 7.50e-155

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCCGGTCTTCGAATACACCGCGCGCAACGTCAAAGGGGAGATCGTCCAGAACAAGGGCGAGTTCGCCACCCGCGACGACGTCCTCGCGCACCTGCGCAAGAACCGCATGGTCGTCGTGCAGGTGCGGGAGGCGCCCCGCGCCTTCAAGATCAAGTTCGGCGCCGGGATCAAGACGCGGGACGTGGTGGTCTTCACCCGCCAGTTCGCGACGATGATCAACGCCGGACTGCCGCTCGTCCAGGCCCTCGACATCCTGGCGCAGCAGACCGAAAACAAGCTGCTCGCCGACGTCACGCGCGCGGTGGTCTACGACGTCGAAAGCGGCCACACCCTCGCCGACGCTCTGCGCAAGCACCCCAAGGCGTTCAGCGACCTGTACGTGAACATGGTCGCGGCCGGCGAGGCGGGCGGTATTCTCGACACCATCCTGCTGCGCCTCGCCGAGTTCCTCGAGAAGAACGACGCCATCGTGCGCAAAGTCAAAGGCGCGATGGTGTACCCCGCCGTGATTTTCTCTGTGGCCGGCATCGCCGTCTCGGTGCTGCTCATCTTCGTGATCCCCACCTTCCAGAGCATGTTCGCCTCGGCGGGCATCCAGCTGCCGCTCCCCACGCGCATCGTGATCGGCCTGAGCAACGTCCTCAAGCACTACTGGTGGGCGCTCATCGGCGTGGCCGGCGGTTCGGTGTTCCTGGTCAACCGCTGGTACAAGACCCCCGGCGGGAAGCTCCAGATCGATACCCTGCTGCTCAAGCTGCCCGTGCTGGGCGACCTGCTGCGCAAGTCGGCGGTGTCCCGCTTCACGCGCACGCTCGGCACCCTGATTTCCTCGGGCGTGTCGATTCTTGACGGCCTGGAGATCACGGCCCGCACGGCCGGCAACATGGTGATCCACAATGCCGTGATGGAGTCGCGGGCCTCGATCGCCGGCGGCGAAACGATCGCGGGGCCGCTCGCCAAGTCCAAAGTGTTCCCGCCCATGGTCATCTCCATGATCGCGGTCGGCGAACAGACCGGCGGGCTCGACGAGATGCTCTCCAAGATCGCCGACTTCTACGACGAGGAAGTGGACGCCGCGGTCAGCACGCTGCTCTCCCTCATGGAGCCGATCATGATCGTCGTGCTCGGCGTCATCGTCGGCGGCATGGTGGTCGCGATGTACCTGCCGATCTTCGACATGGTGAACGCGGTGCAGTAG
PROTEIN sequence
Length: 400
MPVFEYTARNVKGEIVQNKGEFATRDDVLAHLRKNRMVVVQVREAPRAFKIKFGAGIKTRDVVVFTRQFATMINAGLPLVQALDILAQQTENKLLADVTRAVVYDVESGHTLADALRKHPKAFSDLYVNMVAAGEAGGILDTILLRLAEFLEKNDAIVRKVKGAMVYPAVIFSVAGIAVSVLLIFVIPTFQSMFASAGIQLPLPTRIVIGLSNVLKHYWWALIGVAGGSVFLVNRWYKTPGGKLQIDTLLLKLPVLGDLLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNMVIHNAVMESRASIAGGETIAGPLAKSKVFPPMVISMIAVGEQTGGLDEMLSKIADFYDEEVDAAVSTLLSLMEPIMIVVLGVIVGGMVVAMYLPIFDMVNAVQ*