ggKbase home page

13_1_40cm_3_scaffold_2621_10

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(9282..9623)

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma-factor antagonist; K04749 anti-sigma B factor antagonist Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 113.0
  • Bit_score: 203
  • Evalue 1.20e-49
anti-sigma-factor antagonist; K04749 anti-sigma B factor antagonist id=12555746 bin=CNBR_ACIDO species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 114.0
  • Bit_score: 145
  • Evalue 2.80e-32
anti-anti-sigma factor family protein similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 116.0
  • Bit_score: 69
  • Evalue 9.30e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAACGTCAAAACCGAACAGGCCGGCGCGATTTCGATCGTCCGCGTCGGCGAAACGCGGCTGATGTATCCGATTCTGGGCGACTTCTCGTCCGCGGTCACCGGGCTGATTGCATCCGGCCAACGCGAGATCCTCATCGACCTCACGCCGGTCACCTACGTCGACAGCGCGACGATCGGCTGCCTGATGGACTTGTACCGGCAGGTGCACACCGCGGGCGGTCATCTGAAGCTGTCGGGCGTGCAGAAGCGCGTCGAGACGATGCTGACGATGACCGGCGCGCAGAACTTCATCGAGATTCATGCCGACGAGCCGAGCGCCGTCAAGAGCTTCGGGGCTTAG
PROTEIN sequence
Length: 114
MNVKTEQAGAISIVRVGETRLMYPILGDFSSAVTGLIASGQREILIDLTPVTYVDSATIGCLMDLYRQVHTAGGHLKLSGVQKRVETMLTMTGAQNFIEIHADEPSAVKSFGA*