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13_1_40cm_3_scaffold_2621_11

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(9623..10258)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 217.0
  • Bit_score: 346
  • Evalue 3.70e-92
ECF subfamily RNA polymerase sigma-24 factor id=12555747 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 204.0
  • Bit_score: 266
  • Evalue 2.60e-68
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 193.0
  • Bit_score: 174
  • Evalue 2.90e-41

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGTCGCCAGATTCACAGGCCGCGTCTTCGTCGCCAGACGCGATCGAAGCGCTGATACAGCGATGCCTGCAGGGCGATCAGATCGCCTGGGACCTCATCGTCCGTCAGTACTGGCGGAAGGTGTTCAACGTCGCGTACAAGTTCGTCGGCAAGCACGACGAAGCCGAGGACCTGACGCAGGACATCTTCCTGAAGATCTTCAAGTCGCTGGACACGTTCGACCGCCGCGCGAATTTTCAAACGTGGCTGATCAGCGTCAGCCGCAACTTGTGCATCGATCACTATCGCAGCGTGCGGAAAGAGCGCGAGACGATCGATCGCGACGTGGACGCGAATGAGCTCACGCCGGCGTCGCACGAGCCTGGACCGGTGGCGGCGCTCGAGCAACGCGATCGGGTGATGCTGCTGCGACAGGCGATGGCCGAGCTGCCGGACACGCTGCGGACCGCGGTCATGATGCGTGACATTCAGGAGTTGTCCTACCAGGAAATCGCCGACCGGCTGCGCCTGCCGGAAGGCACGGTGAAATCGCGGATCAACCGCGGCCGCACCGAGCTCGCGCGACAGATCCGCAAGCTGCGCGGCGAGGACTTCAGTCCCAGCGGGGCGATGTCCAAACGCACGGGAGCGTACTGA
PROTEIN sequence
Length: 212
MSPDSQAASSSPDAIEALIQRCLQGDQIAWDLIVRQYWRKVFNVAYKFVGKHDEAEDLTQDIFLKIFKSLDTFDRRANFQTWLISVSRNLCIDHYRSVRKERETIDRDVDANELTPASHEPGPVAALEQRDRVMLLRQAMAELPDTLRTAVMMRDIQELSYQEIADRLRLPEGTVKSRINRGRTELARQIRKLRGEDFSPSGAMSKRTGAY*