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13_2_20cm_scaffold_5448_7

Organism: 13_2_20CM_Gemmatimonadetes_69_27

partial RP 20 / 55 MC: 1 BSCG 21 / 51 ASCG 7 / 38
Location: 6963..7199

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 66.0
  • Bit_score: 78
  • Evalue 2.90e-12
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 66.0
  • Bit_score: 78
  • Evalue 8.10e-13
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH37516.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantia similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 66.0
  • Bit_score: 78
  • Evalue 4.00e-12

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 237
GTGGCCGATGTGACGGATAACGAAGCCGCCCTCGAGCGGGCGGAGCAGTTGGCGCTGGTGGCGCGGGCGCTCGCCCAGCTCGCGCCGGACCAGCGCGAAGCGTTCGTGCTGAAACACGTCGAGGGGTTGAGTTATCAGGAGATGGCCGACGTGACCGGCGAGCGCATCCCGACGCTCAAGATGCGCGTGCATCGGGCGCGAGAAGCGCTGTTGCAGGTATTGGAGGACCACGCATGA
PROTEIN sequence
Length: 79
VADVTDNEAALERAEQLALVARALAQLAPDQREAFVLKHVEGLSYQEMADVTGERIPTLKMRVHRAREALLQVLEDHA*