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13_2_20cm_scaffold_6215_3

Organism: 13_2_20CM_Gemmatimonadetes_69_27

partial RP 20 / 55 MC: 1 BSCG 21 / 51 ASCG 7 / 38
Location: comp(1055..1951)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 221.0
  • Bit_score: 302
  • Evalue 6.50e-79
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=24433501 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 285.0
  • Bit_score: 274
  • Evalue 1.80e-70
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 246.0
  • Bit_score: 271
  • Evalue 2.50e-70

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 897
GTGACCGACCACCCGCGTCGCAGGACCGTAACCGTCGACGTCGGCGGCGTGAAGGTGGGCTCCGCCCATCCGATCGTCGTCCAGTCGATGACCAACACCGATACCGCCGACGTCGCAGCCACGGCGGCACAGGTGCGGGCCCTGCATGCCGCCGGCAGCGAGCTGCCGGTCATCGGCGACTTCCACTACAACGGCCATTTGCTGCTCACCAAGTACCCGGCGTGCGCCCGCGCGCTCGCCAAGTACCGCATCAATCCCGGCAACGTCGGGGCGAAGCGCCGCGACGAGCACTTCCGCACCATCATCGAGGTCGCCCTCGCGAACGACCGGCCGGTACGCATCGGCGTCAACTGGGGGAGCCTCGACCAGCAGCTCCTCACCGAGCTGATGGACGAGAACGCGCGCCGCGCGGAGCCGCTCGACGCGCGCGACGTGCTGATCGAAGCCATGCTGGCGAGCGCGCTGCGCTCCGCCGAGCTCGCCGAGCAGTGCGGGTTGCCGCATGACCGCATCATTCTGTCGGCCAAGGTATCGGGCGTGCAGGACCTCGTGGACGTGTACCGCCGGCTCGCCCAGCTCGCCGAGTACCCGTTACACCTCGGGCTCACCGAGGCGGGGATGGGCGCGAAGGGCATCATCGCCAGTGCCGCGGGCCTATCGATCCTGCGGACCGCACCGAGGAGGTGCAGGTCGCGCAGCAAATCCTCCAGTCGCTCGGCCTGCGCAGCTTCACGCCCCAGGTGTCGGCGTGCCCCGGCTGCGGCCGTACCACATCGACCTTCTTCCAGGACATGGCCGAGCAAATCCAGGCGCATCTGCGGGAGCAGATGCCGCGCTGGCGGGAGCGCTACCCCGGCGTGGAGTCGTTGCGCGTCGCGGTCATGGGGTGCGTGGTGA
PROTEIN sequence
Length: 299
VTDHPRRRTVTVDVGGVKVGSAHPIVVQSMTNTDTADVAATAAQVRALHAAGSELPVIGDFHYNGHLLLTKYPACARALAKYRINPGNVGAKRRDEHFRTIIEVALANDRPVRIGVNWGSLDQQLLTELMDENARRAEPLDARDVLIEAMLASALRSAELAEQCGLPHDRIILSAKVSGVQDLVDVYRRLAQLAEYPLHLGLTEAGMGAKGIIASAAGLSILRTAPRRCRSRSKSSSRSACAASRPRCRRAPAAAVPHRPSSRTWPSKSRRICGSRCRAGGSATPAWSRCASRSWGAW*