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13_2_20cm_scaffold_6215_11

Organism: 13_2_20CM_Gemmatimonadetes_69_27

partial RP 20 / 55 MC: 1 BSCG 21 / 51 ASCG 7 / 38
Location: comp(8919..9521)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 166.0
  • Bit_score: 101
  • Evalue 8.10e-19
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Bacteroidetes_43_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 167.0
  • Bit_score: 111
  • Evalue 1.40e-21
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 179.0
  • Bit_score: 110
  • Evalue 4.90e-22

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Taxonomy

RBG_13_Bacteroidetes_43_22_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGTCGGAGCCCAGTTTCCGTCCCCGGTCCTGGACACCCGCGCCGGCGTCGCCCCGCACGGGCGCCGCAGCGTGGGAGGCGGCGTTCGCGACGTGCTACGTCGAGCTGTGCGAGTACGTCCTCCGCCTGGTCGGTTCGGCGGAAGCCGCGGAGGATGTCGTGCACGACCTCTTCCTGCAGCTGTGGGATACACGCGGTGCGCCTGGCCAGGGCCGTCTGAGCCGGCCATACTTGTTCGTCGCGGCGCGCAACCGGGCGCTCAAATACCTGCGGCACCGGCGCGTCGTGGCGGCGTGGATCGAGCGTGCCAGCCAGGAGCAGGCTCCCCTCGTGGACTCACCGGAAGATGAATGTCTGCGGCGCGAGCTGGATGACGCAGTTCAGCGGGCGATCGCCGAGCTGCCGAGCCGATGCCGGGAGGTGTTCGTCCTGCGCCGCCGGGACGCGCTGCCCTATGACCAGATCGCGGCGCGTCTCGGCGTGTCGCTGGGAACCGTGAAGTCGCAGATGTGGCGTGCGACCGTACGGCTCAAGGAGCGCTTGATGCCGTTCCTCGCCCCTCCCGTGTCCGCCAAGGACCGCCCCACCTACCACCTGTTCTAG
PROTEIN sequence
Length: 201
MSEPSFRPRSWTPAPASPRTGAAAWEAAFATCYVELCEYVLRLVGSAEAAEDVVHDLFLQLWDTRGAPGQGRLSRPYLFVAARNRALKYLRHRRVVAAWIERASQEQAPLVDSPEDECLRRELDDAVQRAIAELPSRCREVFVLRRRDALPYDQIAARLGVSLGTVKSQMWRATVRLKERLMPFLAPPVSAKDRPTYHLF*