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13_2_20cm_scaffold_1541_10

Organism: 13_2_20CM_Rokubacteria_70_12

partial RP 29 / 55 MC: 1 BSCG 27 / 51 ASCG 7 / 38
Location: 7778..9124

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1V3_DESTA id=5223401 bin=16ft_combo_ws3_JS1 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 444.0
  • Bit_score: 420
  • Evalue 1.80e-114
  • rbh
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 448.0
  • Bit_score: 726
  • Evalue 2.80e-206
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 451.0
  • Bit_score: 409
  • Evalue 1.50e-111

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1347
GTGGATAACGTCCTCGTGGTAGACGACGAGCGGAACATCCGGGCCCTGGTGGCCAGGGTCCTGGGCCAGGATCAGGTCGAGGTCCATGGAGCCGCGACGGGGAAGGAAGGGCTCCAGATGGCCGACGAGGTGAGCCCGGACCTCGTCCTCCTCGACCTCCGCCTCCCGGACATGGACGGCATGGACGTCCTCCGGGCGCTGCGGAGCCGCTACCCCGAGGTCGCCGTGATCATCATCACGGGCTTCGGCCAGATCCAGAGCGCAGTGGAGGCCATCAAGGTCGGCGCGACCGACTACCTCGAGAAGCCCTTCGAGCACGTCGAAAAGCTCAAGCTTGCCGTCGGACGCGCCCTCGACGAGGTCCGGGCGAAACGCGAGATCCGGCGGTTGCACGGGCTCCAGGAGAAGCAGTACGGAGTCGACCAGATCATCGGCGACTCCGAACCCACCCGTAGTCTCCGCGACCTGATCCGCAAGGTCGCGCGGAGCGAGGCGCAGACGATCCTGATTCTGGGCGACAGCGGGACCGGTAAGGAGCTCGTGGCGCGCGGCCTGCACTACGAGAGCACGCGGCGGGACTTTCCCTTCATGGAAGTCAACTGCGCGGCGATCACGGAGACGCTCTTCGAGAGTGAGCTGTTCGGTCACGAGAAAGGCGCCTTCACCGACGCGAAATCCGCCAAGAAGGGGCTCATGGAGCTCGCCGACCGGGGGACGCTCTTCCTGGACGAAGTGAGCGAGATGTCGCTCAACAGCCAGGCGAAGTTCCTGCGGGTCCTCCAGGAGCGCGTGTTCCGGCGCGTCGGCGGCACGCGTGACATCAAGGTGGACTTGCGTGTCATCACGGCCTCGAACCGGCCACTCGAGGTCCGAGTCAAGGAAGGGCTGTTCCGCGAGGACCTCTTCTACCGTCTGAACGTCATTCCGATCCACATCCCGCCGCTCCGCGAGCGTCGGGATGACATCATGCCGCTTGCCCGGCACTTCCTCACGGAATCGAACGTGCGCTCGCACAAGGCGATCAAGGGATTCACGCCGGAGACCGAGCGTCTCATTTTCAGCTATCCCTGGCCGGGCAACGTGCGAGAGCTCCGCAACCTGATCGAGCGCCTCGTCATCCTCGGCACCTCCGACCACATCGAGCCCCAACACCTTCCAATCCAGTTCGCGTCCCAGGCCGTCGAGGTGCCACGCCAGATGGGGTCGCAAGAGTTCCGGACCCTTGCAGAAGTGGAGCGCGCCTACATCAACCAAGTCATGCAGAGGGTGGAGGCGAACAAGAGCAAGGCCGCGAAAATCCTTGGGATCTCCCGCCAGACCCTGCGCAAGAAGCTTATGGAGGCGTGA
PROTEIN sequence
Length: 449
VDNVLVVDDERNIRALVARVLGQDQVEVHGAATGKEGLQMADEVSPDLVLLDLRLPDMDGMDVLRALRSRYPEVAVIIITGFGQIQSAVEAIKVGATDYLEKPFEHVEKLKLAVGRALDEVRAKREIRRLHGLQEKQYGVDQIIGDSEPTRSLRDLIRKVARSEAQTILILGDSGTGKELVARGLHYESTRRDFPFMEVNCAAITETLFESELFGHEKGAFTDAKSAKKGLMELADRGTLFLDEVSEMSLNSQAKFLRVLQERVFRRVGGTRDIKVDLRVITASNRPLEVRVKEGLFREDLFYRLNVIPIHIPPLRERRDDIMPLARHFLTESNVRSHKAIKGFTPETERLIFSYPWPGNVRELRNLIERLVILGTSDHIEPQHLPIQFASQAVEVPRQMGSQEFRTLAEVERAYINQVMQRVEANKSKAAKILGISRQTLRKKLMEA*