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13_2_20cm_scaffold_6950_6

Organism: 13_2_20CM_Rokubacteria_70_12

partial RP 29 / 55 MC: 1 BSCG 27 / 51 ASCG 7 / 38
Location: comp(2616..4238)

Top 3 Functional Annotations

Value Algorithm Source
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 524.0
  • Bit_score: 955
  • Evalue 4.40e-275
2-isopropylmalate synthase/homocitrate synthase family protein id=3960116 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 527.0
  • Bit_score: 934
  • Evalue 4.40e-269
cimA; alpha-isopropylmalate/homocitrate synthase family transferase similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 523.0
  • Bit_score: 643
  • Evalue 7.40e-182

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1623
TTGACACTCCGCGGCGCGGGGGCGCATCATGACGATTACGCCATGCGACAGCTGATCACGATCTACGACACGACCCTCCGGGACGGGACGCAGGGCGAGGGGGTGTCCTTCTCGATGGAGGACAAGGTCCGCCTCGCATCAAGGCTCGACGCGCTCGGCATCCACTACATCGAGGGGGGCTGGCCGGGCTCCAATCCCAAGGACTTGCGCTTCTTCCGCCGGATGCAGGACGTGACGCTCAAGCACGCGAAGCTCGCGGCGTTCAGCATGACCCGCCGTGCGGGCGGCACCGCCGAGTCGGACGCCAACATGCAGGCGCTCCTCGACGCGGGCGCGCCCGTCGCAACGATCGTCGGTAAGGCGTGGGACTTCCAGGTGACCCACGCGCTCTCGACGACGCTCGACGAAAACTTGAAGATGATCGCCGACACGATCGCCTTCCTCCGTCCGCGTACGGAGGAGGTGATGTTCGACGCCGAGCATTTCTTCGACGGCTTCCGGCGGAACCGCGAATACGCGCTCGCGACGCTCCGGGCCGCCGAAGCCGCCGGCGCCCACTGGCTCGTGCTCTGCGACACGAATGGCGGCACGCTCCCGCGGGACCTCGTCGCGATCGTCCAGGCCGTCAAGACGGCCGTGAAGGCGCCGCTTGGCATCCACGTCCACAACGACGCCGAGTGCGCGGTCGCCAACTCGCTGGCCGCCGTCGGCGAGGGCGTGCGGCAGGTGCAGGGCACGATGAACGGCTACGGCGAGCGGTGCGGGAACGCGAACCTGGTCTCGATCATCCCGAGCCTGGTCCTCAAGATGGGGCTGGACTGCATCCCGGAACCGAACCTGCACGAGCTGCGGGACGTCTCGCGGTTCGTCTCCGAGCTGGCCAACCGCAAGCCGTGGGCCGCGCAGCCCTACGTCGGCGACTCCGCCTTCGCCCACAAGGGCGGCATGCACGTGTCCGCCGTGCTCAAGCACCCGGAGACGTACGAGCACATCGAACCCGCGGCGGTAGGCAACCGTCGGCGCGTGCTCGTGTCCGAGCTCGCGGGCAAGTCGAACATCCTCTGGAAGGCGCGCGAGTACGGTATCGACATCGACCGCGACACGCCGGACTCGCGGCGGATCCTCGACGAGCTCAAGGCGCTCGAGGACCAGGGGTTCCAGTTCGAGGGCGCGGAGGCGTCGTTCGAGCTCCTGATGGAGCGCGCGCTCGGCCGGCACAAACCCTACTTCGAGCTCGACGCGTATCGCGTGATCGTCGAGGAGCAGAGCCACGCCGCGGAGCCGGTCGCCGAGGCGACGGTCCGCGTCCGCGTCAAGGGTAGCCTCGAGCACACCGCGGCGTCCGGTAACGGGCCCGTCAACGCGCTCGACCACGCGCTGCGCAAGGCGCTCGAGGAGTTCTACCCGAACCTCCGGGCGATGCGGCTCCTCGACTACAAAGTGCGCATCCTCGACGAGTCCAAGGGCACCGCGGCCAAGACGCGCGTGCTCATCACCTCGGGCGACGGCGAGGAGACGTGGGGCACCGTCGGGGTCGCGGACAACATCATCGAGGCGTCCTGGCAGGCGCTCGTGGACTCGATCGAGTACAAGCTGCGCCGGGACGAGCGGGCGCGGCCATGA
PROTEIN sequence
Length: 541
LTLRGAGAHHDDYAMRQLITIYDTTLRDGTQGEGVSFSMEDKVRLASRLDALGIHYIEGGWPGSNPKDLRFFRRMQDVTLKHAKLAAFSMTRRAGGTAESDANMQALLDAGAPVATIVGKAWDFQVTHALSTTLDENLKMIADTIAFLRPRTEEVMFDAEHFFDGFRRNREYALATLRAAEAAGAHWLVLCDTNGGTLPRDLVAIVQAVKTAVKAPLGIHVHNDAECAVANSLAAVGEGVRQVQGTMNGYGERCGNANLVSIIPSLVLKMGLDCIPEPNLHELRDVSRFVSELANRKPWAAQPYVGDSAFAHKGGMHVSAVLKHPETYEHIEPAAVGNRRRVLVSELAGKSNILWKAREYGIDIDRDTPDSRRILDELKALEDQGFQFEGAEASFELLMERALGRHKPYFELDAYRVIVEEQSHAAEPVAEATVRVRVKGSLEHTAASGNGPVNALDHALRKALEEFYPNLRAMRLLDYKVRILDESKGTAAKTRVLITSGDGEETWGTVGVADNIIEASWQALVDSIEYKLRRDERARP*