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13_2_20cm_scaffold_107_25

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(24845..25390)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14430305 bin=bin3_NC10 species=unknown genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 151
  • Evalue 1.10e-33
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 151
  • Evalue 1.50e-33
rpoE; RNA polymerase sigma-70 factor, sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 168.0
  • Bit_score: 140
  • Evalue 5.30e-31

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Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 546
ATGGCCTGGAGGAGCGAGGGGTTGGACGCCGGAGCGGCGCTGGGCAGGGAGGCTCTCGCCTACGCCGACGCGCTCCACAATCTGGCGCACTATCTTACCGGCAACGCCGCGGATGCCGAGGATCTCGTCCAGGAGACCTACGCCCGTGCCCTCAAGGCGGCCAGCCAGTTCACACCCGGAACCAATCTCAAAGCGTGGCTGTTCCGCATTCTCCGCAACACCTTCATCAGTCTCTATCGCCGGCGTCGCAACGACCCGACGGTCGGAGGCCTCGACACCGTGATGCCAGCGATTGCCGCACCGACCGACGAGGCCTGGCTTCGTGGCGACCTCGAGCTGGATCGATTGCGAAAGATCGTGGGCGAGGAGATCGAGAGAGCGTTGATGGCTCTCTCGGAGGAGGCCCGGACGGTCATTCTGCTCGATCTCGAGGGTCTGACCGAGATCGAGGTGGCCGAGGTCGTCGGCTGTGCGGTGGGCACCGTGAAGTCCCGCTTGTCCCGGGCGCGGACCGTGCTGCGTCAGCAACTCCGAGACTACGCCTGA
PROTEIN sequence
Length: 182
MAWRSEGLDAGAALGREALAYADALHNLAHYLTGNAADAEDLVQETYARALKAASQFTPGTNLKAWLFRILRNTFISLYRRRRNDPTVGGLDTVMPAIAAPTDEAWLRGDLELDRLRKIVGEEIERALMALSEEARTVILLDLEGLTEIEVAEVVGCAVGTVKSRLSRARTVLRQQLRDYA*