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13_2_20cm_scaffold_1147_12

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 12648..13151

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626943 bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 156.0
  • Bit_score: 179
  • Evalue 2.60e-42
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 156.0
  • Bit_score: 179
  • Evalue 3.60e-42
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 170.0
  • Bit_score: 102
  • Evalue 8.60e-20

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Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGATGAGCGGGCATTCGCGCGGGTGACCGAGGCTTACGGCGCGCGCTTCTACGCGGTGGCCTTCCGGCTCCTTCACAACCGGGCCGACGCCGAGGACGCGGTCCAGCGCGCGCTGACGAACTGCTTCGCGGCCCGCGCCGACTATTCGCCCCGATGGCCGCTGTCGACGTGGCTCTATCGCGCCCTGACGAACGTCTGTCTCGACGAGCTCAGGCGGCGGCGCGTTCGCGCCGAGCACGCGGAGGCCGGCGCGCCGCCGCGGGCGATCGGCCGGCTCGACGTGGAATCGGTGGACCTCCAGCGCGCGCTCGAGCGCGTGCCTCGCGAGGCCCGCGTCCTCCTCGCGCTCCGCTACGTCGACGGCCTGTCCTACGGTGAGCTGGCGCGGATTCGCGGGATCAGCGTGAATACGGTGAAGAGCCAGCTCGCTCGAGGCAAGACGATTCTCCATCAAACGCTCGATCTGCCCGACGGGCGATCCGCCCGCCGGCGTGGGAGGTGA
PROTEIN sequence
Length: 168
MDERAFARVTEAYGARFYAVAFRLLHNRADAEDAVQRALTNCFAARADYSPRWPLSTWLYRALTNVCLDELRRRRVRAEHAEAGAPPRAIGRLDVESVDLQRALERVPREARVLLALRYVDGLSYGELARIRGISVNTVKSQLARGKTILHQTLDLPDGRSARRRGR*