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13_2_20cm_scaffold_472_17

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 15760..17508

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 582.0
  • Bit_score: 851
  • Evalue 5.70e-244
Lipid A export ATP-binding/permease protein MsbA id=4600885 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 583.0
  • Bit_score: 844
  • Evalue 8.40e-242
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 570.0
  • Bit_score: 540
  • Evalue 7.30e-151

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1749
GTGAGCGCGATGCCGCTCGGTCCCTATCGGCGGCTGCTGCCCTACGTGAGGCCGCACGCCCCGATGCTGGTCGTCGGCTCCCTGCTCGCCCTGCTGGTCGCGGCCATGGACGGCGCCGTCGCCTGGCTGGTGAAGCCGGCCATGGACGACATCTTCATCAAGCGCGACCTGCTCATGTTGAAGCTGGTCCCGCTGGGGCTCCTCGCCGCCTACGTCCTCAAGGGCGTCGCCCGTTACCTGCAGTCCTATCTCATGGCGGCGATCGGCGAGAAGGTCGTGGCCACGCTGCGGCGCGACCTCTATATCCACATCCAGGGCATGCCGCTGTCGTTCTTCGCCGGCGTCCACTCCGCCGACCTCATGTCGCGCGTGCTCACCGACGTGAGCCGGCTGTCGCGGATCTCCTCCGGTTTGCTCGTCATGGCGGTCCGGCAGGCCGGCACGATCGTGGCGCTGCTGGTCGTGATGTTCGCCCGCGAGTGGGTGCTCACCGCGTGCGCGCTGGTCGCGTTTCCCTTCATCGCGCTCATCGTCCGCATCGTCGGCCGGCGCCTGTACAAGATCAACAAGCGCGCCCAGGAGCGGGTGGCCCAGCTCGCGGTGCTCCTCCACGAGGCGTTCACCGGCACGAAGATCGTGAAGGCGTTCGGACGCGAGCGCCACGAGCAGGAGCGCTTCGACGCCATCAACCAGCGCCTGCTCCGGCTGTCGCTCCAGAACGTGCGGGCCGACGAGATCACCGAGCCGCTGATGGAGATCGCCGGCGCCTTCGGCATGGTGCTCGCGCTGAGCTACGGCGGCTGGCGCGTGATCCAGGGCGCCATGACGCCCGGCACCTTCTTCTCCTTCACGGCCGCCGTCATCATGCTCTACGGCCCGGCGCGCCGGCTGTCACGCTCGATCAACACCGTGCAGCAGACCACCGGCTCGGTCGAGCGTGTCTTCGACATCATCGACCAGCCACCCGGCCTCGCCGATCGGCCCGGCGCCCTCACCCTGCCCGGGTTCACCGACACGATCGTCTTCGACCACGTCTCGTTCCGCTATGCGCGGGCCGACGAGCTGGCCCTGACCGACATCACGCTGACCATTCGCAAGGGCGAGGTGGTGGCCTTCGTGGGCATGAGCGGCGCCGGCAAGTCCACGCTGATGGACCTGCTGCCGCGCTTCCACGACGTGACGGCCGGCCGGATCACCGTGGACGGCCACGACCTTCGCGATGTGACGCAAGCCTCGCTGCGGGCGCAGATCGCGGTGGTGACCCAGGAGACCTTCCTCTTCGGCGAGTCCATCTACTACAACATCGCGTACGGTCGCCCCGGCGCCGGGACCGACGACGTCGTGCGGGCCGCGCGCCAGGCTCACGCCCACGATTTCATCGTCGCCTGCACCGAAGCCTACGACACGCTCGTGGGCGAGCGCGGCGTGCGGCTGTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGCGCGTTCCTCAAGAATCCGCCTATCCTGATTCTCGACGAGGCCACCTCCGACCTCGACGCCGAGAGCGAGTTCATGGTGCAGCAGGCGCTGACCGAGCTGATGCGCGACCGCACCGTGCTCGTCATTGCGCACCGCCTGTCGACCGTCCGCAACGCCGACCGCATCGTGGTCATCCACGAGGGCCGCGTGGCCGAGGTGGGCCGCCACGAGGAGCTGCTGGCGCGTGACGGCGTCTACCGGAGGCTCTACGCGCTGCAGATGGAGGGCGTGGCGGGCTAG
PROTEIN sequence
Length: 583
VSAMPLGPYRRLLPYVRPHAPMLVVGSLLALLVAAMDGAVAWLVKPAMDDIFIKRDLLMLKLVPLGLLAAYVLKGVARYLQSYLMAAIGEKVVATLRRDLYIHIQGMPLSFFAGVHSADLMSRVLTDVSRLSRISSGLLVMAVRQAGTIVALLVVMFAREWVLTACALVAFPFIALIVRIVGRRLYKINKRAQERVAQLAVLLHEAFTGTKIVKAFGRERHEQERFDAINQRLLRLSLQNVRADEITEPLMEIAGAFGMVLALSYGGWRVIQGAMTPGTFFSFTAAVIMLYGPARRLSRSINTVQQTTGSVERVFDIIDQPPGLADRPGALTLPGFTDTIVFDHVSFRYARADELALTDITLTIRKGEVVAFVGMSGAGKSTLMDLLPRFHDVTAGRITVDGHDLRDVTQASLRAQIAVVTQETFLFGESIYYNIAYGRPGAGTDDVVRAARQAHAHDFIVACTEAYDTLVGERGVRLSGGQRQRIAIARAFLKNPPILILDEATSDLDAESEFMVQQALTELMRDRTVLVIAHRLSTVRNADRIVVIHEGRVAEVGRHEELLARDGVYRRLYALQMEGVAG*