ggKbase home page

13_2_20cm_scaffold_21680_5

Organism: 13_2_20CM_Rokubacteria_69_15_2

partial RP 36 / 55 MC: 1 BSCG 35 / 51 ASCG 8 / 38
Location: comp(2475..3026)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 179.0
  • Bit_score: 242
  • Evalue 4.60e-61
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 179.0
  • Bit_score: 242
  • Evalue 6.40e-61
putative RNA polymerase sigma factor, sigma-24-like protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 180.0
  • Bit_score: 152
  • Evalue 1.40e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACCGGCTCGGGCGCGGAGCTCATCAGGCAGATGGTCGCCGGTGATCGAGAAGCGTTCGCTCGCTTCTACGACCGCTACGCGCCCCTGGTCTTCCCGCTCATCCAGCGCATTCTCCGGGAGCGCGCCGACGCGAGCGATGTGCTGCAGGAGGTCTTCTGGGAGGCGTGGCAGGGCGCGGCGGGCTATGACCCCGCACGCGGAAGCCCGGAGGCATGGCTCGTGACGCGGGCGCGGACCCGGGCCATCGACCGGATCCGGGCCATGCGGCGACGCAGCGAGACGTTCGTGGCGCCCCTCCACGACGCGCTCGCCGCCGCGCCCGCCGACCCGGGCGGCGACGTGGCGGAGCGCACGGAGGACCGCCGGACGGTCCAGCACGCGCTGGCGCAGCTGCCATCGGCCCAGCGGGAGGTGATCGAGCTCGCGTACTACGCGGGGCTCACGCAGACGGAGATCGCCGAGCGGCTCAAGCAGCCGCTCGGGACGGTGAAGACGCGCATCCGGCTCGCGCTCGAGCGGCTGCGCGAGGTCGTCAGGCCCACGACATGA
PROTEIN sequence
Length: 184
MTGSGAELIRQMVAGDREAFARFYDRYAPLVFPLIQRILRERADASDVLQEVFWEAWQGAAGYDPARGSPEAWLVTRARTRAIDRIRAMRRRSETFVAPLHDALAAAPADPGGDVAERTEDRRTVQHALAQLPSAQREVIELAYYAGLTQTEIAERLKQPLGTVKTRIRLALERLREVVRPTT*