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13_2_20cm_scaffold_585_19

Organism: 13_2_20CM_Rokubacteria_69_15_2

partial RP 36 / 55 MC: 1 BSCG 35 / 51 ASCG 8 / 38
Location: comp(16061..17911)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD id=3357851 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 621.0
  • Bit_score: 859
  • Evalue 2.00e-246
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 620.0
  • Bit_score: 859
  • Evalue 2.90e-246
RpoD subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 618.0
  • Bit_score: 593
  • Evalue 7.70e-167

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1851
ATGAGTGAAGAGCCCAAACTGGAGGAGCTGGACCGGCTGATCACGATGGGGAAGCAGAAAGGCTTCCTCACCTACGACGAGGTCAACGACGCGCTGCCGTCGGACATCGTCTCACTCGACCAGCTCGACGACATCATGATGATGTTCGGCGCAATGGACATCGAGGTCGTCGACTCCGCAAAGGCGGGGCGGCTCCCCTCGGAGGTTGGGCGCGAGCGCCAGGCGGTGCCAGCCGAGGAGGCCGATGACGACGGCCCGCCCGAGTCGATCGACCTGACGCCCGGGCCCGTCGGCCGCACCGAGGATCCGGTGCGCCTCTATCTGCGCGAGATGGGCCGCGTCGCCCTCCTGACGCGTGAGGGCGAGATCGCCCTCGCCAAGCGGATCGAGGAAGGGAAGAACCAGGTCACCGCCGCGATCCTCTCGACCAACCTCGCCCTCGAACGCTTCCGCGAGCTGCGCGAGCAGCTCAGGCGCGGTGAGAGCTCCATCAAGGAGGTTGTGGACGTCAACGAGGAAGAGTTCACCGAGGAGAAGGAGGAGGAGCTCCGGCGCCAGGTGATCGCGGCCTTCGGCACGGTGGACCGGCTCCTCCGCGACCGCGACAAGCTCGTCGCCCAGGCCAAGAAGCTCCGGCTCAAGGCCGGCGGCAGGAAGAAGACGAAGAAGGGCAAGGAGCCCGCGTGGAGGCGGCTGGAGGCCCAGGCGCACAAGTACCAGGAGAAGGTGCTCGACAACCTCCGCAAGCTCAACATCGGCAACCAGATCGTCGACCGCGAGGACGGGGAGCCCGGCCGCCGCGGCCTCGTCCAGCGGCTGCGCGACCTCCTCGACGACATCGAACGCGCCGAGCAAGTGATCAAGCTCTGGACCAACGGCCGCCGCCCCTCGCCCGAGGAGGTGCAGAACCTCATCTACGTCTCGTTCCGCGATCCGGGCACGGGCACCGTCAACGGCCCGGTCGGCGACCTCCACCTCAAGGCCGCCAAGAAGTTCCAGTCGCCGAAGGCGCAGCAGATCTGGGTCGCACAGCAAGAGGTCAAGCTCGCCGAGCAGCGCGCCAACGCCAAGGCCGACGAGATCAAGCGCGTGATGACGATCATCAGGCAGGGCCAGATCAAGGCGGCGCAGGCCAAGAAGGAGATGGTGGAGGCGAACCTGCGGCTCGTGATCTCGATCGCCAAGAAGTACACGAACCGCGGGCTCCAGTTCCTCGACCTTATCCAAGAAGGCAATATCGGCCTCATGAAGGCGGTCGATAAGTTCGAATATCGGCGTGGTTATAAGTTTTCGACCTACGCGACCTGGTGGATCCGGCAGGCGATCACGCGCGCCATCGCCGACCAGGCCCGCACGATCCGCATCCCCGTGCACATGATCGAGACGATCAACAAGCTCATCCGGACCTCGCGCCAGCTCGTCCAGGAACTCGGCCGCGAGCCCACCCCGGAGGAGATCGCGGCGAAGATGGACGTCCCCGTGGACAAGGTGCGCAAGGTGCTGAAGATCGCGCAGGAGCCCATCTCGCTGGAGACGCCGATCGGCGAGGAGGAGGACAGCCACCTGGGCGACTTCATCGAGGACAAGCAGGTCGTCTCGCCCGTCGAGTCGATCATCGGCCTCTCGCTCCGGGAGCAGACGAACAAGGTCCTCAACACCCTCACGCCGCGCGAGGAGAAGGTGCTGCGGCTCCGGTTCGGCCTCTCCGACGGTTGCGAGCACACGCTGGAAGAAGTCGGGCAGGACTTCGCGGTCACCCGCGAGCGGATCCGGCAGATCGAGGCCAAGGCGCTGCGCAAGCTCCGGCACCCGTCGCGTTCGAAGAAGCTCCGGAGCTTCCTGGAGACCTGA
PROTEIN sequence
Length: 617
MSEEPKLEELDRLITMGKQKGFLTYDEVNDALPSDIVSLDQLDDIMMMFGAMDIEVVDSAKAGRLPSEVGRERQAVPAEEADDDGPPESIDLTPGPVGRTEDPVRLYLREMGRVALLTREGEIALAKRIEEGKNQVTAAILSTNLALERFRELREQLRRGESSIKEVVDVNEEEFTEEKEEELRRQVIAAFGTVDRLLRDRDKLVAQAKKLRLKAGGRKKTKKGKEPAWRRLEAQAHKYQEKVLDNLRKLNIGNQIVDREDGEPGRRGLVQRLRDLLDDIERAEQVIKLWTNGRRPSPEEVQNLIYVSFRDPGTGTVNGPVGDLHLKAAKKFQSPKAQQIWVAQQEVKLAEQRANAKADEIKRVMTIIRQGQIKAAQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQLVQELGREPTPEEIAAKMDVPVDKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKQVVSPVESIIGLSLREQTNKVLNTLTPREEKVLRLRFGLSDGCEHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRSKKLRSFLET*