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13_1_40cm_scaffold_12198_1

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 2..325

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 107.0
  • Bit_score: 176
  • Evalue 2.50e-41
Major facilitator superfamily MFS_1 id=3564806 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 104.0
  • Bit_score: 171
  • Evalue 3.40e-40
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 102.0
  • Bit_score: 112
  • Evalue 9.10e-23

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 324
GTGCTGATCCTCATCGCGTGGGCGCCCACGGCCGCGGTCGCGATCGCGCTCCTGTGCCTGCGTCACCTGCTCTCGCAGATGGACGTGCCGACCCGGCAGGCGTACGTGATGGCCCTCGTCGAGGACCACGAGCGCGAGGCGGCGGCGACCACCACCAACATCGCGCGGACCGTCGCCCAGGCGGTCACGCCCGCGCTGACGGGGTGGGTGATGCAGGCCGTGGCGCTCGCGGCGCCGTTCGTGGCGGGCGGCGCTCTGAAGATCGTCTACGACCTGCTGCTCTACTGGACCTTCAAAGACGTCAAGCTGAAGCTCGACGCGTGA
PROTEIN sequence
Length: 108
VLILIAWAPTAAVAIALLCLRHLLSQMDVPTRQAYVMALVEDHEREAAATTTNIARTVAQAVTPALTGWVMQAVALAAPFVAGGALKIVYDLLLYWTFKDVKLKLDA*