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13_1_40cm_scaffold_1178_18

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(15792..16121)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 72.0
  • Bit_score: 120
  • Evalue 1.30e-24
two component system response regulator, sigma54-specific id=14627447 bin=bin7_NC10_sister species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 77.0
  • Bit_score: 110
  • Evalue 9.60e-22
response regulator receiver modulated diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 85.0
  • Bit_score: 75
  • Evalue 1.30e-11

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGCGCGCGAGTTGCGGGCCGCGGACGGGGTGGATGCCTCCCGGGGAGTACGCCCCGTGGTGCTCATCGTCGACGATGATCTCGGCATCCGGGAGTCGTTCCGCCTGATCCTGGAGGACGACTACGACGTCCTGGACGTCCCCGACGGTCGGAGCGCGCTCGACGTCGTGCGATCGCGCCAGGTGGATCTCGTGCTTCTCGATATCCGGCTGCCCGAGATGGACGGGATCGAGGTGCTCGAGCGTCTCAAGGCCATCGACGAGGTTCGAGGACGACGAGCTGCTCGCCGTTGTCCGCCGCGCGCTGGAGAAGCGATCGCTCGAGCGTGA
PROTEIN sequence
Length: 110
MARELRAADGVDASRGVRPVVLIVDDDLGIRESFRLILEDDYDVLDVPDGRSALDVVRSRQVDLVLLDIRLPEMDGIEVLERLKAIDEVRGRRAARRCPPRAGEAIARA*