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13_1_40cm_scaffold_22_3

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: 1135..2778

Top 3 Functional Annotations

Value Algorithm Source
BNR/Asp-box repeat protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5B8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 548.0
  • Bit_score: 369
  • Evalue 5.70e-99
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDT08643.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gr similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 548.0
  • Bit_score: 369
  • Evalue 8.00e-99
BNR/Asp-box repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 535.0
  • Bit_score: 368
  • Evalue 4.70e-99

Lists

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Notes

Non-viral sialidases; Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases. Cristina Butterfield (8/24/16)

Taxonomy

Burkholderia graminis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGCGACGGTTTCTGATCATCTCCGCTATCTTCGCCGTCGGCGCCATCGGCCTCGTCACGGCGTACGCCGGACCGTTCACGGCAGATCCGCTGACGCTCGTGTCGGGCTCGGGGGTGGGGACGAGCCCGTTCACGCATTGCACCGCGGACAACGTTGCCGCCCAGCCCGGAAGGAACTTCCCCGACAGCGAGGTGGAACCCTGGGTCGACGTGAACCCGAGAAACTCCCTGAACATCGTCGGGAGCTGGCAGCAGGACCGCTGGTCGAATGGCGGGTCGCGGGGGCTCGTCGCCGGGGTGAGTTTCGACGGTGGGGCTCACTGGACCAATGTTGTCATCCCGCGCATCACGCTCTGCTCCGGCGGGACCCCCGCGAACGGCGGGGACTACAAGCGAGGGTCCGACCCGTGGCTCTCCTTTGCGCCGAACGGCGATCTCTTCCACGTGAGCCTGTCGTTCGACTTCGAGGCGCCCCCGGGCTTCCCCGGCGCCATGGGGAAGAACGCCCTGCTCGTGAGCAGATCCCTCGACGGGGGGGTGACGTGGAGCGATCCGGTCACGATCATCAAGGACACGAGTCCCCGGATCCTGAATGACAAAGAGGCGATTACCGCTGACCCGGGAAACTCGAATTTCGTGTATCTCGTCTGGGATCGGGTAGAGAGCCCGGTCGGCACCCTCATCAACCCTGAGAAGGTGATCGGCCTCGGCTTCAAGAGCCCGGCGACGTTCTCGCGCACGACGAACGGCGGCGTGAGCTGGGAGGTCCCCAGCATCATCTACGACCCGGGCGCGAACAATCAGACCATTGGCAACCAGATCGTGGTGCTCCCCAATGGAACCCTCGTCGACTTCTTCAACGAGCTCCTGAACTTCAGGAACGACGAGGGCGGCAGCCACCTCGACTTCAACCTGTCGCTGAAGCGCTCCAGCGACAGGGGCGTCACCTGGCTGCCTCACGGGCCGCCGATCCGGGCGGCCAAGATGCAGTCGCGGGCCGTCATCGATCCGCAGCTAAACGGCGTGAGAGACCCCGACACGGGTGCCCGGGTCCGCACCGGCGACATCCTTCCGCAGGTCGCGGTCGATCGGAACCCGCGGAGCCCGGGCTTCGGCAACCTCTACGCGGTCTGGCAGGACGCGCGCTTCAGCAGCTTCGCCCACGACAGCATCGCCTTCTCGATGTCCAGGGACGGCGGTTTCACGTGGTCGACGCCGATCCAGATCAACCGGACTCCCACGAACATCCGGTCGGGCGATCAGCAGGCGTTCACCCCGACGGTCCGCGCCGCGGCCGATGGCACCATTGGCGTGACCTACTACGACTTCCGCAACACCACGCCGTGTCCGATTGTCAGCGGTAGGCCCGACTGCACGGGGGTCTCCCTCAAGACAGATTACTTCCTTGTGCACTGCCATCTCTCGGCGAGCGTATCGTGCACAAGCTCCGCGAACTGGGCGAGCGAAGCTCGGATCACGCCTGCATCCTTCGACATGAGGAAGGCCCCCGTCGCCCGCGGCTTCTTCGTGGGCGACTACGAGGCGCTCGCGGTGATCGGGAACGAATTCAAACCCTTCTTCGTCCAGTCGGGCATCGTGACCGGGGACCCGAGCGACGTGTTCTTTACCAGCGTCGGCCCGTAG
PROTEIN sequence
Length: 548
MRRFLIISAIFAVGAIGLVTAYAGPFTADPLTLVSGSGVGTSPFTHCTADNVAAQPGRNFPDSEVEPWVDVNPRNSLNIVGSWQQDRWSNGGSRGLVAGVSFDGGAHWTNVVIPRITLCSGGTPANGGDYKRGSDPWLSFAPNGDLFHVSLSFDFEAPPGFPGAMGKNALLVSRSLDGGVTWSDPVTIIKDTSPRILNDKEAITADPGNSNFVYLVWDRVESPVGTLINPEKVIGLGFKSPATFSRTTNGGVSWEVPSIIYDPGANNQTIGNQIVVLPNGTLVDFFNELLNFRNDEGGSHLDFNLSLKRSSDRGVTWLPHGPPIRAAKMQSRAVIDPQLNGVRDPDTGARVRTGDILPQVAVDRNPRSPGFGNLYAVWQDARFSSFAHDSIAFSMSRDGGFTWSTPIQINRTPTNIRSGDQQAFTPTVRAAADGTIGVTYYDFRNTTPCPIVSGRPDCTGVSLKTDYFLVHCHLSASVSCTSSANWASEARITPASFDMRKAPVARGFFVGDYEALAVIGNEFKPFFVQSGIVTGDPSDVFFTSVGP*