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13_1_40cm_scaffold_550_20

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(20687..21604)

Top 3 Functional Annotations

Value Algorithm Source
appB; ABC-type transporter, permease component: PepT family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 303.0
  • Bit_score: 321
  • Evalue 1.40e-84
Dipeptide transport system permease DppB id=4948701 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 304.0
  • Bit_score: 316
  • Evalue 3.20e-83
h16_A2950; ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 301.0
  • Bit_score: 296
  • Evalue 9.70e-78

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
GTGAGACGGTTCGTCCTCACCCGGATCGTTCAGTCGGTCGTGACGCTGCTCGTCCTGTCGCTCATGGTGTTCCTGCTCGCGCGGGCCACCGGCGATCCCCTGAGCCTCGTGCTGCCGCTCGGCGCCACCCAGGAAGACTACGAGAACGCGCGGCACTATCTCGGCCTCGACCTGCCGCTCTCCGTCCAGTACGTGAAGTTCATCGCCAACGCCGTCAGGGGAGACTTCGGCATCTCGCTGCGGGTCCGGCGTCCGGTGGTGGACCTCCTGTGGGAGCGCTTTCCGAACTCGCTCGCGCTCGCCGCCGTCTCCATGGCCCTGAGCCTCGCCCTCGCCTTTCCGCTGGGCGTCCTGGCCGCCGTCCACCGCGACCGGGCGCTCGACCGCGCCGCCAAGATCGTGGCGACGCTGGGCCAGGCCCTGCCGACCTTCTGGCTGGGGATCGTCCTGATCGAGGTCGTGGCCGGGCGCCTGCAGTGGCTGCCGGCCGGAGGCACGGGCGACCTCTCCCACTATGTCATGCCCGCGTTCACGCTCGCCTGGTTCGTGCTGGCCGGCATCATGCGGCTGCTCCGCTCGTCGCTCCTCGAGGTGCTGGACTCCGACTTCGTGCGGACGGCGCGGGCCAAGGGTGTGCCCGAGGCCGGCGTCGTGTGGCGCCACGCGCTCCGGAACGCGCTCATCCCGGTCGTCACCTTCGCCGGCGTATACTTCGCCATCCTCGTCACCACCGCGATCGTCGTCGAGACCGTATTCGCGTGGCCGGGCATGGGGCGCCTGGCCTACGAGGCGATCACCGCGCGCGACTTCCCGGTGATCCAGGCGGTGGTGCTGGTCACCGCGCTGGTCGTGGTGGTCGCGAACTTCACCGTGGACCTCCTCTACGTCTACCTCGACCCGCGGATCCGCTACGGATGA
PROTEIN sequence
Length: 306
VRRFVLTRIVQSVVTLLVLSLMVFLLARATGDPLSLVLPLGATQEDYENARHYLGLDLPLSVQYVKFIANAVRGDFGISLRVRRPVVDLLWERFPNSLALAAVSMALSLALAFPLGVLAAVHRDRALDRAAKIVATLGQALPTFWLGIVLIEVVAGRLQWLPAGGTGDLSHYVMPAFTLAWFVLAGIMRLLRSSLLEVLDSDFVRTARAKGVPEAGVVWRHALRNALIPVVTFAGVYFAILVTTAIVVETVFAWPGMGRLAYEAITARDFPVIQAVVLVTALVVVVANFTVDLLYVYLDPRIRYG*