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13_1_40cm_scaffold_5512_7

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 5430..6650

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 408.0
  • Bit_score: 696
  • Evalue 2.10e-197
Extracellular ligand-binding receptor id=2724781 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 401.0
  • Bit_score: 661
  • Evalue 5.40e-187
branched-chain amino acid ABC transporter, periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 393.0
  • Bit_score: 221
  • Evalue 4.00e-55

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGATGAGGATCGTGCTCACGGTAATCGTCGCGCTCGCGGTGGTGATGGCCGGCGGCGTTGGCTTCGCCCCGGCCCAGGGACAGAAGGTCGTGAAGATCGGCGACCTCGGCTCGAAGGTCGGGGTGTTCGAGGGGTACGGCAAGTATCAGACGATGGGGATGACGCTGGCCGTCGAGGAGCTGAACGCCAAGGGCGGCGTCCTCGGCCACAAGATCGAGATCGTCTCCGAGGACGACGAGACGAAGCCGGCGCCGGCCGTCCGCAAGGCCGAGAAGCTCATCCTGCAGGACGACGTGAAGCTCCTGGTCGGCGCGGTCTCCTCGGGCGCGACCATGGCCATCATGGACGTCACCAAGAAGCACAAGACCGTGCACTGGAACTCCGTGTCCTGCGCGGAGTTCATGCGGACGACGAAGTTCCACAAGTACTACTTCTCGAACCAGCCGGACTCGCGCATGCAGTCCAACGGCCTGGCCAAGTACATCCTCGACAAGATGGGCAAGAAGGTCTACATCTTCTACACCGACTACGCCATGGGCCAGTCGGACGGGCGCCAGTTCAAGACCGCGCTCGAGAAGCTGGGTGGCGAGGTCGTGGGCGTGGCCGGCGCGCCGCTCGACACCAAGGACTTCAGCCCCTGGTTCGGCGCCATCACCGACTCCAAGCCCGAGGTCCTGTTCCTGGCCTTCGCGGGCACCGACTCCATCCGGCTGATGACGCAGCTCCACTCCTTCGGCATGACGAAGAAGTACAAGCTGGCCGGCATCGACTGCTTCCTCCTGCAACAGGATCTGCCCGCCATCGCCGAGCCGATGGAGGGCTTCGTCCAGCTCAACCACTTCTCCGCCTTCAACCCCGATCCGGCCATGCAGACGTTCAACCAGAAGTTCAAGAAGCGCTGGAACCTCGACGCCAACATCGCGGCTGGCGCCTACGACGCGGTGCTCTTCTGGGCGGCGGCCGTGGAAAAGGCCAAGAGCTTCGATCCCGACAAGGTGGCCGAGGCCCACGAAGGGATGTGCCTGGACAACACCCACATCGGGCGCCAGTGCATTCGCAAGGACGATCACCAGGTCGTGATGGACATGCACCTCTACCAGGTCAAGGGCGGCAAGAACGTTCCCATCGCGCGCATCGCCGGCAGCGACTCGATCGGCGAGCCCATGGTGGGCAAGGATCCGGTGGCCGGCTTCACCTGGGAGATCAAGAAGAAGAACTAG
PROTEIN sequence
Length: 407
MMRIVLTVIVALAVVMAGGVGFAPAQGQKVVKIGDLGSKVGVFEGYGKYQTMGMTLAVEELNAKGGVLGHKIEIVSEDDETKPAPAVRKAEKLILQDDVKLLVGAVSSGATMAIMDVTKKHKTVHWNSVSCAEFMRTTKFHKYYFSNQPDSRMQSNGLAKYILDKMGKKVYIFYTDYAMGQSDGRQFKTALEKLGGEVVGVAGAPLDTKDFSPWFGAITDSKPEVLFLAFAGTDSIRLMTQLHSFGMTKKYKLAGIDCFLLQQDLPAIAEPMEGFVQLNHFSAFNPDPAMQTFNQKFKKRWNLDANIAAGAYDAVLFWAAAVEKAKSFDPDKVAEAHEGMCLDNTHIGRQCIRKDDHQVVMDMHLYQVKGGKNVPIARIAGSDSIGEPMVGKDPVAGFTWEIKKKN*