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13_1_40cm_scaffold_1846_8

Organism: 13_1_40CM_Nitrospirae_62_7

partial RP 15 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(6394..7140)

Top 3 Functional Annotations

Value Algorithm Source
lptB; putative lipopolysaccharide ABC transporter ATPase (EC:3.6.3.-); K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 237.0
  • Bit_score: 380
  • Evalue 2.10e-102
lptB; putative lipopolysaccharide ABC transporter ATPase (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 237.0
  • Bit_score: 363
  • Evalue 4.00e-98
ABC-type transport system, ATPase component, putative lipopolysaccharide transport system n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCY4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 237.0
  • Bit_score: 363
  • Evalue 1.40e-97

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 747
GTGATTCCGATCGCACCGAGCGCAAACCAGTGTTTGGAGGCCTCCGGCCTGACGAAGGGCTTCAAGGGACGTCAGGTCGTGAAGGGCGTGAGTGTGGCCGTCCAAGCCGGGGAGGTGGTCGGACTGTTGGGACCGAACGGGGCCGGCAAGACAACCATCTTCGACATGATGGTCGGGCTGTGCCAGCCGGACGCCGGTCAGATCCTGCTCAACGGGGAGGAGATCACGGAGCTCCCAATGTTCAAGCGTGCGCGGCGGGGGATTGGGTACTTGCCACAAGAGTCATCCGTGTTTCGTCGGTTGTCGGTCGAGGAGAATATTCTGGCGATTCTTGAGATGCTGGACATATCAGCAGAGGAGCGGGCTCTTCGCGTCGAATCATTGCTGAAGGAGCTCGACCTCACCCCTCTCCGGAAGAGTAAAGCCTACGCCTTGTCAGGGGGGGAACGGCGCCGCCTGGAGATTACGCGGGCCTTGGTGACACATCCGCAGTTCTTGCTCCTTGACGAACCATTCGCCGGGATCGATCCCATCGCGGTGGCGGATATTCAAGACATCGTGACGCGGCTCAGACACAAGCAGATCGGGATCTTGATCACCGATCACAATGTTCAGGAAACCCTCACCATCACGGACCGGGCATATATCATCAACGAGGGCAGTATCCTGGAGTCAGGCTCACCTGACACGATTGTCAACAGCTCCACGGCAAGGGCGGTGTATCTGGGTGAAAACTTCAGGTTGTAA
PROTEIN sequence
Length: 249
VIPIAPSANQCLEASGLTKGFKGRQVVKGVSVAVQAGEVVGLLGPNGAGKTTIFDMMVGLCQPDAGQILLNGEEITELPMFKRARRGIGYLPQESSVFRRLSVEENILAILEMLDISAEERALRVESLLKELDLTPLRKSKAYALSGGERRRLEITRALVTHPQFLLLDEPFAGIDPIAVADIQDIVTRLRHKQIGILITDHNVQETLTITDRAYIINEGSILESGSPDTIVNSSTARAVYLGENFRL*