ggKbase home page

13_1_40cm_scaffold_1846_12

Organism: 13_1_40CM_Nitrospirae_62_7

partial RP 15 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(9011..9961)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 331.0
  • Bit_score: 497
  • Evalue 1.10e-137
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 332.0
  • Bit_score: 490
  • Evalue 3.60e-136
DNA-directed RNA polymerase subunit alpha n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCY0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 332.0
  • Bit_score: 490
  • Evalue 1.30e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 951
ATGATTAAGGTAATGAAGGACTTTCAGGCCCCAATGCGGGTCGAAGCCGACAAGGAAGCGCTTTCCCCGACCTACGGCAAGTTCACAGCCGAGCCGTTCGAGAGAGGATTTGGCACGACCGTTGGCAACTCCCTGCGTCGCGTGCTGCTGTCCTCCTTGACCGGTGCCGCGGTCACAACCGTGCGCATTGAAGGGGTGTTGCACGAGTTTTCCACCATCCCGGGGGTCACTGAGGATGTGACCGCGATCGTGCTCAACGTCAAGACGCTTCGGTTGAAGCTGCACACGGACAAACCCAAAACGATCCGTCTCCGCAAAAAAGGGCCTGGAGAGGCGAAGGCCTCGGACATCATCCATGATGCGGACGTCGTGATCCTGAACGGGGACCTCCATATTGCCACGCTGGATAAGGAGGCGACGCTGGACAAGGAAGGACTGCCGATCGGCGTGATCGCCGTGGATTCGATCTACTCGCCGGGGAAGCGCGTCAATTTCCTAGTGGAGAACGCACGCGTCGGCCGGGTGACGGATTACGACAAGATGATTCTCGAGATCTGGACGGAGGGGAGCCTCATTCCACAGGACGCCCTGTCCGCGGCCGCAGGCATTCTCAAGGACCATCTGGATATTTTTATCCATCCTGAAGAGCTCACGGCCACGAAACCGGAAGCAGGGATGGAGGAGGAGCGGCGCGAAGTCAACAAGAACCTGTTCCGGAGCGTCAACGAGCTCGAGCTGTCCGTCCGAGCGGCCAATTGTCTCAAGAACGCCAATATCAAGACGATCGCGGACCTCGTCCAGAAGACGGAAATGGAAATGTTGAAGACCAAGAACTTCGGGAAGAAATCGCTCAATGAGATCAAGGAGATTCTGGCCGAGATGGGGCTGAGCCTCGGGGTGAAACTCGACTCTCTGCCATCGGGGGACGTGGGCGCAAAGACCGGCGTATGA
PROTEIN sequence
Length: 317
MIKVMKDFQAPMRVEADKEALSPTYGKFTAEPFERGFGTTVGNSLRRVLLSSLTGAAVTTVRIEGVLHEFSTIPGVTEDVTAIVLNVKTLRLKLHTDKPKTIRLRKKGPGEAKASDIIHDADVVILNGDLHIATLDKEATLDKEGLPIGVIAVDSIYSPGKRVNFLVENARVGRVTDYDKMILEIWTEGSLIPQDALSAAAGILKDHLDIFIHPEELTATKPEAGMEEERREVNKNLFRSVNELELSVRAANCLKNANIKTIADLVQKTEMEMLKTKNFGKKSLNEIKEILAEMGLSLGVKLDSLPSGDVGAKTGV*