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13_1_40cm_scaffold_4397_11

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: 9243..10019

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 253.0
  • Bit_score: 320
  • Evalue 1.90e-84
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 258.0
  • Bit_score: 320
  • Evalue 2.00e-84
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 257.0
  • Bit_score: 228
  • Evalue 2.70e-57

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 777
GTGGCCGCACTGGCCATCGTGGTGGCCGGGTGCCGCAAGGCGCAGACGGCGCAGATGTACGAAGCCGTGCCGGTCGAGCGCCGGAACCTCGTCGTCTCGGCGTCCGCATCGGGCGCCATCGAGCCGGTGCTGACCGTGGACGTCAAGTCCAAGGCGTCGGGCGAAATCATCGGGATGAACGTCCAGACGGGCGACGACGTGAAACAAGATCAGCTGCTCGCCTCGATCGATCCGCGGATCCCGCGCAACAACCTCGCGCAGGCGCAGGCGAATCTGCAGGTCGCGCACGCGCAGCTCGCGAACGCCAAAGCCCAGCTCGCGCGGTCGGACACGCTGTTCAAGGCCCAGGCGATCACGCAGACCGAATACGACCAGTCGAAGCTCGATTATGCCAACGCCAACGCGGCGGTGATTCGCGCCCAATCGGATCTCGAGAACGCGCGCGATCGCATGACCGACACGAAGGTCCGCGCGCCCCTTGCCGGAACGATCATCACAAAGAGCGTCGAGCTCGGCACCGTGATCTCGTCGCCGTCGACGGATGTTGGCGGCGGGACGGTCATGTTCCGGATGGCGAACCTCGACACGGTACAGATCCGCGCATTGGTTGACGAGACGGACATCGGCAAAGTGTCGCCGGGTCTGCTCTCCACCATCACCGTGGACGCGTATCCCAATCGTCCGTTCGAAGGCACCGTTTTGAAAATCGAGCCGCAAGCCACGGTCCAGCAAAACGTCACCATGTTCAACGTGCTCGTGCGGATTCCCAACCCGAAT
PROTEIN sequence
Length: 259
VAALAIVVAGCRKAQTAQMYEAVPVERRNLVVSASASGAIEPVLTVDVKSKASGEIIGMNVQTGDDVKQDQLLASIDPRIPRNNLAQAQANLQVAHAQLANAKAQLARSDTLFKAQAITQTEYDQSKLDYANANAAVIRAQSDLENARDRMTDTKVRAPLAGTIITKSVELGTVISSPSTDVGGGTVMFRMANLDTVQIRALVDETDIGKVSPGLLSTITVDAYPNRPFEGTVLKIEPQATVQQNVTMFNVLVRIPNPN