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13_1_20cm_3_scaffold_3758_2

Organism: 13_1_20CM_3_Betaproteobacteria_63_8

partial RP 36 / 55 MC: 2 BSCG 34 / 51 MC: 3 ASCG 7 / 38 MC: 2
Location: comp(1101..2105)

Top 3 Functional Annotations

Value Algorithm Source
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 330.0
  • Bit_score: 493
  • Evalue 2.90e-136
gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 314.0
  • Bit_score: 486
  • Evalue 5.50e-135
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DB4244 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 315.0
  • Bit_score: 495
  • Evalue 5.50e-137

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Taxonomy

R_Betaproteobacteria_64_12 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
TTGCTGACCGAATCTCCGGCCTGCGCGGAGGCCCTGGCAAAATACCGCATCAACCCGGGAAATGTCGGCAAAGGCAGTAAGCGAGACGCGCAATTCGCGATCATGATCGAGCAGGCGCTGAAGTGGGATAAGCCGGTGCGGATCGGCGTCAACTGGGGCAGCCTCGACGCCGATCTGCTGGCGCGCATGATGGACGAAAATGCGCGCTCGGCGGCCCCGCTCGATGCAGCGCATGTGATGCGCGAGGCCTTGGTCAGCTCCGCGATCGGTAGTGCGCAACGCGCCGAGGAGCTCGGGCTTAGGCAAGATCGCATCATCCTTTCATGCAAGGTTTCAGGCGTGCAGGACCTGATCGCGGTTTATGCCGAGCTTGCGCGTCGCTGCGATTATCCCTTGCATCTCGGCTTGACCGAGGCGGGAATGGGGTCGAAGGGCATCGTCGCGTCGACGGCGGCAATGGCGGTGTTGTTGCAGCAGGGGATCGGCGACACGATCCGGGTTTCGCTCACGCCCGAGCCCAACGGCGATCGCACGCGCGAGGTTCTCGTCGCGCAGGAGATTCTGCAGACCATGGGGCTGCGTTCCTTCGCGCCTCAGGTGACCGCCTGCCCAGGATGCGGGCGCACCACCAGCACCGTATTCCAGGAGCTCGGCGAAAAAATCCAGGCGTATCTGCGCGAGCAGATGCCGGGTTGGCGCGCGCGCTATGCCGGGGTTGAGAGCATGACGGTGGCGGTCATGGGTTGCGTGGTCAACGGCCCGGGCGAATCGAAAATGGCCAACATCGGCATTAGCTTGCCCGGCACGGGTGAGGTCCCGGTCGCGCCGGTCTACGTCGATGGTCAGAAGACGGTCACGCTCAAGGGCGAGCGCATCGCCGAGGAATTCCAGCAGATCGTTGCCGATTACGTTCGCGCGACCTATGGCGGCGAGCCGGCAACAGCGCACCTCAAGCCCGCGGCCCGAACCAATACCATTGCCATCGCCGTCAAGGCGATCATTTAG
PROTEIN sequence
Length: 335
LLTESPACAEALAKYRINPGNVGKGSKRDAQFAIMIEQALKWDKPVRIGVNWGSLDADLLARMMDENARSAAPLDAAHVMREALVSSAIGSAQRAEELGLRQDRIILSCKVSGVQDLIAVYAELARRCDYPLHLGLTEAGMGSKGIVASTAAMAVLLQQGIGDTIRVSLTPEPNGDRTREVLVAQEILQTMGLRSFAPQVTACPGCGRTTSTVFQELGEKIQAYLREQMPGWRARYAGVESMTVAVMGCVVNGPGESKMANIGISLPGTGEVPVAPVYVDGQKTVTLKGERIAEEFQQIVADYVRATYGGEPATAHLKPAARTNTIAIAVKAII*