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13_1_20cm_3_scaffold_503_6

Organism: 13_1_20CM_3_Betaproteobacteria_63_8

partial RP 36 / 55 MC: 2 BSCG 34 / 51 MC: 3 ASCG 7 / 38 MC: 2
Location: comp(2978..4417)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 483.0
  • Bit_score: 568
  • Evalue 1.00e-158
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor id=12497753 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 485.0
  • Bit_score: 566
  • Evalue 3.60e-158
  • rbh
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 484.0
  • Bit_score: 562
  • Evalue 1.50e-157

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Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAGCCAACCCTCCAGCTCAAGCTTTCACAACATTTAACGCTCACTCCGCAGCTGCAGCAGTCGATCCGTCTGCTGCAACTTTCGACCCTCGAGCTCAACGCCGAAGTCGAGCGCCTGCTGCAGGAAAATCCGCTGCTGGAAAAAGCCGACGAGGACGAGACGCCGGCGCCGCCGCCCGAGTTTTCGATGGAAGCCAGCACCGCGACCGTGAGTACCGAGTCGTCGGCGAGTGACGATCGCGACGAGCGGTCGGCGGGCGACTTCGATCTGCTGGCTAATGCCGGCGGCGACGGTGACTGGGGTTCGGCCTCGAGCGACGACGACGACGAGAATTTTTCTCCGCAGCAAGTGGCGACCTGCTCGCTGCGCGATCACCTCAACGCGCAGCTCGCGCTTTGTAACCTTCCCCTTCGCGATCGGCAGATCGTATCGGCGCTGATCGACGCGCTGGACGAGGACGGCTATCTGCAGACCTCGCTGGAAGAGCTGGTGGAATTGTTTCCGGACGAGCTCGGTCTCGAAGCCGACGAGCTTTCGATCGGCCTGCGCCGCCTGCAGAACATGGAGCCCGCAGGGGTCGGTGCCCGCGACGCGGCAGAATGTCTGGGCTTGCAGCTGAAAGCGAAGCCGGCCACGACGCCACTGCTGCAGGAGGCGATGAAATTGGTGGAGCAGCATCTGCCTTTGCTTGCCGCGCGTGACTTCGGCAAACTGAAGCGCCTGCTCCATATTGACGACGCGGAGCTGCGTGGCGTGCGGGCGCTGATCACGAGCCTCAATCCGCGTCCCGGCGCCGAATTTTCCAGGACCGAAGCGAACTATGTGATCCCTGACGTGGTCGTACGCAAGGTAAGGGGCAAATGGATCGCGGCGCTCAACGATGCCGCAATGCCCAAGTTGCGGCTGAACCGGATCTACGCCGACATCCTCACCCGTAATCGCGATTCTTCGAACCAGCAGCTCGCGGCGCAGCTGCAGGAGGCGAAATGGCTGATTCGCAACGTCCAGCAGCGATTCGAAACCATCCTCCGGGTGTCGCAGGCGATCGTAGACCGCCAGCGGCATTTTTTTGACCATGGTGACGTGGCGATGCGGCCGATGGTGCTCCGGGAGATTGCCGAAATTCTGAGCCTGCACGAATCGACGATCTCACGCGTAACCACGCAGAAATACATGCTCACCGAGCGCGGAACTTACGAGCTCAAGTATTTCTTCGGCAGCCACGTCGCGACCGACACCGGAGGCGCTGCGTCCGCGACTGCGATTCGCGCGCTGATCAAGCAGCTCATTGCCGCCGAGGACCGCAACATACCGCTCACCGACAGCCGCATCGCGGACCTCCTCGGAGATCAGGGGATCGTCGTCGCGCGGCGGACGATCGCGAAATATCGCGAAGCGCTGCAAATACCGCCAGTCAATCTGCGTAAGACGATGTAG
PROTEIN sequence
Length: 480
MKPTLQLKLSQHLTLTPQLQQSIRLLQLSTLELNAEVERLLQENPLLEKADEDETPAPPPEFSMEASTATVSTESSASDDRDERSAGDFDLLANAGGDGDWGSASSDDDDENFSPQQVATCSLRDHLNAQLALCNLPLRDRQIVSALIDALDEDGYLQTSLEELVELFPDELGLEADELSIGLRRLQNMEPAGVGARDAAECLGLQLKAKPATTPLLQEAMKLVEQHLPLLAARDFGKLKRLLHIDDAELRGVRALITSLNPRPGAEFSRTEANYVIPDVVVRKVRGKWIAALNDAAMPKLRLNRIYADILTRNRDSSNQQLAAQLQEAKWLIRNVQQRFETILRVSQAIVDRQRHFFDHGDVAMRPMVLREIAEILSLHESTISRVTTQKYMLTERGTYELKYFFGSHVATDTGGAASATAIRALIKQLIAAEDRNIPLTDSRIADLLGDQGIVVARRTIAKYREALQIPPVNLRKTM*