ggKbase home page

08E140C01_10kDa_scaffold_810

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_810_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316..1182)
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
16S rRNA methyltransferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00037B7ECB rbh
uroporphyrin-III C/tetrapyrrole methyltransferase rbh
08E140C01_10kDa_scaffold_810_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1245..3113
DNA (1869bp) protein (623aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002D60850 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH53264.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
LppC family lipoprotein rbh
08E140C01_10kDa_scaffold_810_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3110..3469
DNA (360bp) protein (120aa)
UPF0102 protein O203_05655 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UAD3_PSEME
UPF0102 protein N619_27910 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/p
hypothetical protein
08E140C01_10kDa_scaffold_810_4
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3495..4088
DNA (594bp) protein (198aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
gmhA; phosphoheptose isomerase (EC:5.3.1.-) rbh
Phosphoheptose isomerase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UE25_PSEME rbh
08E140C01_10kDa_scaffold_810_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4085..4618
DNA (534bp) protein (178aa)
Phospholipid-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T437_PSEME rbh
Phospholipid-binding protein {ECO:0000313|EMBL:ERH53261.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
transport-associated protein rbh
08E140C01_10kDa_scaffold_810_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4667..5080)
DNA (414bp) protein (138aa)
Peptidase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SN68_PSEME
Peptidase {ECO:0000313|EMBL:KJU76460.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes grou
ClpXP protease specificity-enhancing factor
08E140C01_10kDa_scaffold_810_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5094..5711)
DNA (618bp) protein (206aa)
Stringent starvation protein A n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T555_PSEME rbh
Stringent starvation protein A {ECO:0000313|EMBL:ERH53259.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
glutathione S-transferase domain-containing protein rbh
08E140C01_10kDa_scaffold_810_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5879..6658)
DNA (780bp) protein (260aa)
Cytochrome C n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UAC7_PSEME rbh
Cytochrome C {ECO:0000313|EMBL:EZH77594.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligen
cytochrome c1-like protein rbh
08E140C01_10kDa_scaffold_810_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..7869)
DNA (1212bp) protein (404aa)
Cytochrome b n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DS02_PSEMN rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcalig
cytochrome b/b6 domain-containing protein rbh
08E140C01_10kDa_scaffold_810_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7869..8462)
DNA (594bp) protein (198aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2) rbh
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UCR5_PSEME rbh
08E140C01_10kDa_scaffold_810_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8717..9109)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=2 Tax=Pseudomonas aeruginosa group RepID=I7IXD9_PSEPS
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
08E140C01_10kDa_scaffold_810_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9124..9552)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SN64_PSEME
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
50S ribosomal protein L13
08E140C01_10kDa_scaffold_810_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9800..10837
DNA (1038bp) protein (346aa)
Aldo-keto reductase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T550_PSEME rbh
Aldo-keto reductase {ECO:0000313|EMBL:ERH53254.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
aldo/keto reductase rbh
08E140C01_10kDa_scaffold_810_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10834..11547)
DNA (714bp) protein (238aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UAC3_PSEME rbh
endonuclease V rbh
08E140C01_10kDa_scaffold_810_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11620..12759)
DNA (1140bp) protein (380aa)
acyl-CoA dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FD2685 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJU76451.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalc
acyl-CoA dehydrogenase domain-containing protein rbh
08E140C01_10kDa_scaffold_810_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12901..13899
DNA (999bp) protein (333aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas mendocina RepID=UPI00037FDBE6 rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:ERH53251.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
transcriptional regulator rbh
08E140C01_10kDa_scaffold_810_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14117..15151
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002D2E382 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH54112.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
08E140C01_10kDa_scaffold_810_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15204..16202
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002EC5AAF rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH54111.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
RND type efflux pump
08E140C01_10kDa_scaffold_810_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16261..18438
DNA (2178bp) protein (726aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E4D5B7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH54110.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
integral membrane protein, transporter
08E140C01_10kDa_scaffold_810_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18478..19572)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SN60_PSEME rbh
Cell division protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; Z ring-associated protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo
AFG1 family ATPase rbh
08E140C01_10kDa_scaffold_810_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19606..20658)
DNA (1053bp) protein (351aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQP6_PSEMY
08E140C01_10kDa_scaffold_810_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20778..21407)
DNA (630bp) protein (210aa)
alpha/beta hydrolase n=1 Tax=Pseudomonas alcaliphila RepID=UPI000367700A rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EZH81863.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoa
alpha/beta fold family hydrolase-like protein rbh
08E140C01_10kDa_scaffold_810_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21529..21960
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa group RepID=I7IDD1_PSEPS
hypothetical protein
Cytochrome D ubiquinol oxidase subunit III {ECO:0000313|EMBL:KJU76444.1}; Uncharacterized protein {ECO:0000313|EMBL:CDR92667.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
08E140C01_10kDa_scaffold_810_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22148..24043)
DNA (1896bp) protein (632aa)
Adenylylsulfate kinase {ECO:0000313|EMBL:ERH53246.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ERH53246.1};; EC=2.7.7.4 {ECO:0000313|EMBL:ERH53246.1};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaprote
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (EC:2.7.7.4) rbh
Adenylylsulfate kinase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T425_PSEME rbh
08E140C01_10kDa_scaffold_810_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24056..24973)
DNA (918bp) protein (306aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenyla
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4) rbh
Sulfate adenylyltransferase subunit 2 n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZK79_9PSED rbh
08E140C01_10kDa_scaffold_810_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25106..25864)
DNA (759bp) protein (253aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=330 species="Bacteria; P
metal-binding protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FB1C6D rbh
hypothetical protein rbh
08E140C01_10kDa_scaffold_810_27
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25975..27117
DNA (1143bp) protein (381aa)
2-alkenal reductase (EC:1.3.1.74) rbh
2-alkenal reductase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UAB2_PSEME rbh
2-alkenal reductase {ECO:0000313|EMBL:KJU76440.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcali
08E140C01_10kDa_scaffold_810_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27206..28855
DNA (1650bp) protein (550aa)
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UE01_PSEME
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ERH53242.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
TonB-dependent siderophore receptor
08E140C01_10kDa_scaffold_810_29
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28852..29205
DNA (354bp) protein (118aa)
TonB-denpendent receptor n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DD8E05
TonB-dependent receptor {ECO:0000313|EMBL:EZH81857.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
TonB-dependent siderophore receptor
08E140C01_10kDa_scaffold_810_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29219..29938
DNA (720bp) protein (240aa)
Nickel transport system substrate-binding protein n=2 Tax=Pseudomonas mendocina RepID=J7UL61_PSEME rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP83654.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
Displaying items 1-30 of 31 in total

View Taxonomy