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08E140C01_10kDa_scaffold_2408

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_2408_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..786)
DNA (786bp) protein (262aa)
acriflavin resistance protein n=1 Tax=Pseudomonas mendocina RepID=UPI000369733E
Multidrug transporter AcrB {ECO:0000313|EMBL:KJU78452.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseud
acriflavin resistance protein
08E140C01_10kDa_scaffold_2408_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(783..1751)
DNA (969bp) protein (323aa)
RND transporter n=1 Tax=Pseudomonas alcaliphila RepID=UPI00036D5B67 rbh
RND transporter {ECO:0000313|EMBL:ERH47157.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD
RND family efflux transporter MFP subunit rbh
08E140C01_10kDa_scaffold_2408_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1971..2765)
DNA (795bp) protein (265aa)
Membrane protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TST9_PSEME rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pse
ABC-2 type transporter, permease protein rbh
08E140C01_10kDa_scaffold_2408_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2762..3694)
DNA (933bp) protein (311aa)
ABC transporter n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMR1_PSEME rbh
ABC transporter {ECO:0000313|EMBL:ERH47159.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD
ABC transporter, ATP-binding protein rbh
08E140C01_10kDa_scaffold_2408_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3849..4511)
DNA (663bp) protein (221aa)
Cysteine protease n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1S5U4_PSEME rbh
Cysteine protease {ECO:0000313|EMBL:EZH76981.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalca
transglutaminase domain-containing protein rbh
08E140C01_10kDa_scaffold_2408_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4652..7099
DNA (2448bp) protein (816aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.-)
acyl-CoA dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030328F6
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJU78447.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalc
08E140C01_10kDa_scaffold_2408_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7216..7602
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E073_PSEMN
Dehydrogenase {ECO:0000313|EMBL:EZH76983.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcalige
hypothetical protein
08E140C01_10kDa_scaffold_2408_trna_4
unknown

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comp(7624..7696)
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_2408_trna_3
unknown

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comp(7714..7786)
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_2408_trna_2
unknown

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comp(7835..7907)
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_2408_trna_1
unknown

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comp(7926..7998)
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_2408_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8221..8985
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TSU4_PSEME rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH47163.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein rbh
08E140C01_10kDa_scaffold_2408_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9050..9712
DNA (663bp) protein (221aa)
glutathione S-transferase family protein (EC:2.5.1.18) rbh
glutathione S-transferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FDE1E6 rbh
Glutathione S-transferase {ECO:0000313|EMBL:ERH47164.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas men
08E140C01_10kDa_scaffold_2408_10
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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9746..10252
DNA (507bp) protein (169aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TG37_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF25176.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; e
08E140C01_10kDa_scaffold_2408_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10201..11091)
DNA (891bp) protein (297aa)
ATPase AAA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SLR2_PSEME rbh
ATPase AAA {ECO:0000313|EMBL:ERH47166.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.
hypothetical protein rbh
08E140C01_10kDa_scaffold_2408_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11202..13523
DNA (2322bp) protein (774aa)
sensor histidine kinase/response regulator (EC:2.7.3.-) rbh
histidine kinase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003086428 rbh
Histidine kinase {ECO:0000313|EMBL:ERH47167.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EG
08E140C01_10kDa_scaffold_2408_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13513..13971)
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TSU8_PSEME
MarR family transcriptional regulator {ECO:0000313|EMBL:KJU78436.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov
Organic hydroperoxide resistance transcriptional regulator
08E140C01_10kDa_scaffold_2408_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14430..15470)
DNA (1041bp) protein (347aa)
pdxB; erythronate-4-phosphate dehydrogenase (EC:1.1.1.-) rbh
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=1182590 sp
Erythronate-4-phosphate dehydrogenase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IE92_PSEPS rbh
08E140C01_10kDa_scaffold_2408_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15658..17031
DNA (1374bp) protein (458aa)
multidrug transporter MatE n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FD2C14 rbh
Multidrug transporter MatE {ECO:0000313|EMBL:ERH47171.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas me
norM3; Multidrug resistance protein mdtK rbh
08E140C01_10kDa_scaffold_2408_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17071..18144
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TWL0_PSEME rbh
Uncharacterized protein {ECO:0000313|EMBL:KJU78432.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein rbh
08E140C01_10kDa_scaffold_2408_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18236..18487)
DNA (252bp) protein (84aa)
sirA; Sulfurtransferase tusA homolog (EC:2.8.1.-)
Sulfurtransferase TusA homolog {ECO:0000256|HAMAP-Rule:MF_00413}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00413};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Sulfurtransferase TusA homolog n=4 Tax=Pseudomonas aeruginosa group RepID=A4XTK1_PSEMY
08E140C01_10kDa_scaffold_2408_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18578..19633)
DNA (1056bp) protein (352aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000255|HAMAP-Rule:MF_01551}; EC=2.1.1.186 {ECO:0000255|HAMAP-Rule:MF_01551};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000255|HAMAP-Ru
Ribosomal RNA large subunit methyltransferase M n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=RLMM_PSEMY rbh
putative RNA 2'-O-ribose methyltransferase rbh
08E140C01_10kDa_scaffold_2408_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19890..22631
DNA (2742bp) protein (914aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1453503 species="Bacteria; Proteobacteria; Gam
acnA; aconitate hydratase (EC:4.2.1.3) rbh
Aconitate hydratase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TQR0_PSEME rbh
08E140C01_10kDa_scaffold_2408_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22808..24244
DNA (1437bp) protein (479aa)
Aerotaxis receptor n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K379_PSEPS
Chemotaxis protein {ECO:0000313|EMBL:KJU78418.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcalig
aer1; Aerotaxis receptor
08E140C01_10kDa_scaffold_2408_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25194..25940
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTJ5_PSEMY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP84661.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
08E140C01_10kDa_scaffold_2408_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26080..26316
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TWS5_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH47232.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
Pathogenicity locus
08E140C01_10kDa_scaffold_2408_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26349..26711
DNA (363bp) protein (121aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTJ4_PSEMY
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABP84660.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;
08E140C01_10kDa_scaffold_2408_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26967..27668
DNA (702bp) protein (234aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTJ3_PSEMY rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP84659.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
08E140C01_10kDa_scaffold_2408_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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27694..28257
DNA (564bp) protein (188aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTJ2_PSEMY rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABP84658.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
08E140C01_10kDa_scaffold_2408_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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28280..28816
DNA (537bp) protein (179aa)
DinB family protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TQR5_PSEME rbh
Diguanylate cyclase {ECO:0000313|EMBL:KJU78579.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcali
DinB family protein rbh
Displaying items 1-30 of 54 in total

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