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08E140C01_10kDa_scaffold_932_20

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 17805..18068

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SBN6_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 70.0
  • Bit_score: 133
  • Evalue 1.40e-28
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 70.0
  • Bit_score: 133
  • Evalue 2.00e-28
flagellar biosynthesis sigma factor similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 70.0
  • Bit_score: 131
  • Evalue 1.20e-28

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGTACAACAAGGCTCAGGCGCAGGACTCCCAGCACCAGCTGATCGAGCGCTATGCGCCGCTGGTCAAGCGCATCGCCTACCACCTGCTGGCCCGCTTGCCGGCCAGCGTGCAGGTCGACGATCTTATCCAGGCCGGCATGATCGGCCTGCTCGAAGCCTCGCGCAAATACGACTCCAGCAAGGGCGCCAGTTTCGAGACATTGGGCGCCGCGTTCCGTGCACCGCAACAGCCGTATGGTCAGCGATGCCATTCGTGTCGTTGA
PROTEIN sequence
Length: 88
MYNKAQAQDSQHQLIERYAPLVKRIAYHLLARLPASVQVDDLIQAGMIGLLEASRKYDSSKGASFETLGAAFRAPQQPYGQRCHSCR*