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08E140C01_10kDa_scaffold_1309_9

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(5353..7653)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1453503 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 766.0
  • Bit_score: 1528
  • Evalue 0.0
Ribonuclease R n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T3F3_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 766.0
  • Bit_score: 1517
  • Evalue 0.0
  • rbh
RNAse R similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 766.0
  • Bit_score: 1507
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2301
ATGGCCGATTGGCAATCCCTCGATCCCGAGGCCGCCCGCGAGGCGGAAAAATACGACAACCCCATCCCCAGCCGTGAGCTGATTCTTTCGCATCTGGCCGAGCGCGGCGCGCCTGCCAGTCGTGAGCAACTGGTCGAAGAGTTCGGTTTGCATACCGAAGATCAGCTCGAAGCTCTGCGTCGCCGTCTGCGCGCCATGGAGCGTGACGGTCAGCTCATCTACACCCGCCGTGGCACCTACGCCCCGGTGGACAAGCTCGACCTGATCTGTGGTCGCATCAGCGGTCACCGTGATGGTTTCGGCTTCCTCGTGCCGGATGACGGCAGCGACGACCTGTTCCTCAGCCCGGCGCAGATGCGCCTGGTGTTCGATCGCGATCGCGCGCTGGTGCGGGTCGCTGGTATCGATCGCCGTGGTCGCCGTGAGGGCGGCATCGTCGAGGTGATCGAGCGCGCGCATGAGAGCATCGTCGGCCGTTACTACGAAGAGAACGGCATCGGCTTCGTCGTCGCCGACAACCCCAAGATCCAGCAGGAAGTGCTGGTTACGCCGGGCCGTACTGGCGGTGCGCGCATCGGTCAGTTCGTCGAAATCAAGATCACCCACTGGCCTACGCAGCGCTTTCAGCCGCAGGGCGATATCGTCGAGGTGATCGGCAACTACATGGCGCCGGGCATGGAAATCGACGTGGCGCTGCGCAGCTACGACATCCCGCATGTCTGGCCCGAGGCGGTGGTCAAGGAGGCGCGCAAGCTCAAGCCCGAGGTGGATGAGAAGGACAAGGAGAAGCGCGTCGACCTGCGTCACCTGCCTTTCGTCACCATCGATGGCGAAGACGCCCGCGACTTCGACGACGCCGTTTACTGCGAGAAGAACAGCAGCCGCTGGAAGCTGTTCTCCGGTGGTTGGAAGCTCTACGTGGCCATCGCCGACGTGTCGCACTACGTCAGAGTCGGCTCGGCGCTGGATGCCGAGGCGGTCGAGCGCGGCAACTCGGTGTACTTCCCCGAGCGCGTCGTGCCGATGCTGCCGGAGGAGTTGTCCAACGGCCTGTGCTCGCTCAACCCGCATGTCGATCGCCTGGCCATGGTCTGCGAGATGACCATGTCCAAGAGCGGCCAGATGGTCGACTACAAGTTCTACGAGGCGGTGATCCACTCCCACGCACGTCTGACCTACAACAAGGTCAGCCTGATGCTGGAAGATCCCAAGAGCAGCGAGGGCAAGTCCCTGCGCAGCGAGTACAAGGACGTCCTGCCGCACCTCAATCAGCTCTATGCCCTGTATCAGGTGCTGGTCGCTGCCCGTCACGAGCGTGGCGCCATCGACTTCGAGACGCAGGAAACCCGCATCATCTTCGGCACCGACCGCAAGATCGACGAGATCCGCCCGACCCAGCGTAACGACGCGCACAAGCTCATCGAAGAGTGCATGCTGGCCGCCAACGTGGCCACAGCGCGCTTCATGCAGGATCACGAGATCCCGTCGCTGTATCGCGTGCACGATGGCCCGCCGCCGGAGCGCCTGGAGAAGCTCAAGGCCTTCCTCGGTGAGCTGGGGCTGTCGCTGCAGCGTGGCAAGTCCAAGGACGGTCCGTCGCCCAAGGACTATCAACGCCTGCTGGAAAGCATCCGCGAGCGCCCGGACTATCACCTGATCCAGACCGTGATGCTGCGTTCGCTGAGCCAGGCGGTGTACAGCGCGCAGAACGAAGGGCACTTCGGTCTCAATTACGAGGCTTATACCCACTTCACCTCGCCGATCCGCCGTTACCCCGATCTGCTGGTGCATCGCGCCATTCGCAGCGTGGTGCGTTCCAAGCGCGACACCAAGCATGTGGAACGCGCCGGCGCAGCGATCATGCCCAAGGCGCGCATCTATCCGTACGACGAGGCGACCCTGGAAAAACTCGGCGAGCAGTGCTCGATGACCGAGCGCCGTGCCGATGAAGCGACGCGTGACGTGGTCAACTGGCTCAAGTGCGAGTTCATGCAGGATCGCGTCGGTGAGACCTTTGCCGGTGTGATCACTGCCGTGACCGGTTTCGGCATCTTCGTCGAATTGCGTGACATTTATGTCGATGGCCTGGTGCACGTGACCGCGTTGCCGGCCGACTATTACCACTTCGACCCGGTTCATCATCGCCTGTCCGGCGAGCGCAGTGGCCGCAGCTTCCGCCTCGGCGACAGCGTCGAGGTCAAGGTGATGCGCGTCGATCTGGATGAACGCAAGATCGACTTCGAACTGAGCCAGGGCAAGGCCGGCAAGGGCGATGATGCGCGTCGTGGCGGCATGCCGTAG
PROTEIN sequence
Length: 767
MADWQSLDPEAAREAEKYDNPIPSRELILSHLAERGAPASREQLVEEFGLHTEDQLEALRRRLRAMERDGQLIYTRRGTYAPVDKLDLICGRISGHRDGFGFLVPDDGSDDLFLSPAQMRLVFDRDRALVRVAGIDRRGRREGGIVEVIERAHESIVGRYYEENGIGFVVADNPKIQQEVLVTPGRTGGARIGQFVEIKITHWPTQRFQPQGDIVEVIGNYMAPGMEIDVALRSYDIPHVWPEAVVKEARKLKPEVDEKDKEKRVDLRHLPFVTIDGEDARDFDDAVYCEKNSSRWKLFSGGWKLYVAIADVSHYVRVGSALDAEAVERGNSVYFPERVVPMLPEELSNGLCSLNPHVDRLAMVCEMTMSKSGQMVDYKFYEAVIHSHARLTYNKVSLMLEDPKSSEGKSLRSEYKDVLPHLNQLYALYQVLVAARHERGAIDFETQETRIIFGTDRKIDEIRPTQRNDAHKLIEECMLAANVATARFMQDHEIPSLYRVHDGPPPERLEKLKAFLGELGLSLQRGKSKDGPSPKDYQRLLESIRERPDYHLIQTVMLRSLSQAVYSAQNEGHFGLNYEAYTHFTSPIRRYPDLLVHRAIRSVVRSKRDTKHVERAGAAIMPKARIYPYDEATLEKLGEQCSMTERRADEATRDVVNWLKCEFMQDRVGETFAGVITAVTGFGIFVELRDIYVDGLVHVTALPADYYHFDPVHHRLSGERSGRSFRLGDSVEVKVMRVDLDERKIDFELSQGKAGKGDDARRGGMP*