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08E140C01_10kDa_scaffold_1309_17

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(16434..16694)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=2 Tax=Pseudomonas aeruginosa group RepID=I7K5D3_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 172
  • Evalue 1.60e-40
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 172
  • Evalue 4.50e-41
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 172
  • Evalue 2.30e-40

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGTCAAAAGGGCATTCGCTACAAGACCCTTACCTGAATACCCTGCGTAAGGAACGCGTCCCTGTTTCCATCTATCTGGTCAACGGCATCAAGCTGCAGGGCCAGATCGAGTCTTTCGACCAGTTCGTCATCCTGCTGAAGAACACTGTCAGCCAGATGGTCTACAAACACGCCATTTCCACCGTCGTGCCTAGCCGTCCGGTGCGCCTGCCGAGTGCTGGCGATGCCGAACAGGCCGATGGCGAGCCAGGTAACGCCTGA
PROTEIN sequence
Length: 87
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSAGDAEQADGEPGNA*