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08E140C01_10kDa_scaffold_1544_29

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 26443..27522

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 factor, ECF subfamily n=1 Tax=Pseudomonas aeruginosa E2 RepID=K1D8Q0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 402.0
  • Bit_score: 417
  • Evalue 1.20e-113
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 359.0
  • Bit_score: 505
  • Evalue 1.60e-140
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KFX69599.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 416.0
  • Bit_score: 446
  • Evalue 3.40e-122

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Taxonomy

Pseudomonas taeanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGTCGATATCGCCATCTGTTACCGAGCTGATTGAACGGCTATACCGCGCGGAGTCGCGCCGGGTGCTCGCCACCCTGATCCGTCTGCTGGGTGATTTCGACCTGGCCGAGGAGGCGCTGCACGAGGCATTTCGCAGCGCTGTCGAGCAATGGCCGCAGAGCGGAGTGCCGGACAACCCACGTGCCTGGCTGGTCTCTGCCGGACGCTTCAAGGCCATCGACAACCTGCGTCGGCAACGTCGTTTCCAGCCGCTGGATGACCAGGTCGAGCTGCCCGAGGAGAATGGTGCCGAACAGGATGAACTGCTCGAAGACGACCGACTGCGCCTGATCTTCACCTGCTGTCACCCGGCGCTGGTGCGCGAGGTCTGCGACCTGACGACCGAGGAGATTGCGCGCGCCTTTCTCTCCAGTCCGTCGACCCTGGCCCAGCGTATCGTGCGGGCCAAGGCGAAGATTCGCGACGCGCGCATACCTTACGAAGTGCCGGGACGCAGCGAGCTGCCCGAGCGCCTGGATGCGGTGTTGCGGGTGATCTATCTGGTGTTCAACGAAGGCTATTTCGCCAGCTCCGGCGACTCACTGACGCGCAGCCAGCTGTCCGACGAGGCGATTCGCCTGGGCCGTTTGTTGCTGGAGTTGCTGCCCGAGCCGGAGGTGCAGGGGCTGCTGGCGCTGATGCTGCTGCACGAGTCGCGTCGTGCTGCGCGCAGCGGCGGCGATGGTGAGGTGATTCTGCTGGACGCTCAGGATCGCAGCCTGTGGAATCGCGAATTGATCGCCGAAGGCGAGGCGCTGGTATTGCAGGCGCTGCACTCGCGTCGCGTGATCGAGCTCAACCGCGCCGTGGCGCTGGCCATGCATGACGGCGAGCAGGCTGGGCTGGTGGAAATCGACCGGCTGCTGGCTACGGGTGAGTTGGACGGTTACCACCTGGCCCACGCAGCGCGGGCCGATCTGCTGCGTAGGCTTGGCCGGCGTGAGCAAGCAGTCGCTGCCTACCGCCAGGCCCTGGCGCTGGCGCAACAGGGCCCGGATCGGCAGTTTCTGCAGAAGAGGCTGGAAGAGCTGGGTGCCTAG
PROTEIN sequence
Length: 360
MSISPSVTELIERLYRAESRRVLATLIRLLGDFDLAEEALHEAFRSAVEQWPQSGVPDNPRAWLVSAGRFKAIDNLRRQRRFQPLDDQVELPEENGAEQDELLEDDRLRLIFTCCHPALVREVCDLTTEEIARAFLSSPSTLAQRIVRAKAKIRDARIPYEVPGRSELPERLDAVLRVIYLVFNEGYFASSGDSLTRSQLSDEAIRLGRLLLELLPEPEVQGLLALMLLHESRRAARSGGDGEVILLDAQDRSLWNRELIAEGEALVLQALHSRRVIELNRAVALAMHDGEQAGLVEIDRLLATGELDGYHLAHAARADLLRRLGRREQAVAAYRQALALAQQGPDRQFLQKRLEELGA*