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08E140C01_10kDa_scaffold_10390_17

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 7142..8017

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 531
  • Evalue 1.70e-148
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 531
  • Evalue 8.50e-148
DNA-directed RNA polymerase subunit alpha n=2 Tax=Pseudomonas aeruginosa group RepID=I7J2A3_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 531
  • Evalue 6.00e-148

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCACGAGTACTCCGCGATCGAAGGTGTGCAGGAAGATGTCATTGAGATCCTGCTCAACCTGAAAGGTCTGGCTATCAAGCTGCACGGCCGTGACGAAGTGACCCTGACTCTGGCTAAGAAGGGCCCGGGCGTAGTTACCGCTGCCGATATTCAGCTGGATCACGATGTCGAAATCGTCAATGGCGACCACGTAATCGCCAACCTGGCCTCCAATGGCGCGCTGAACATGAAGCTCACCGTAGCTCGTGGTCGCGGCTATGAGCCGGCTGACGCGCGTCAGAGCGATGAAGACGAAAGCCGCAGCATTGGTCGCTTGCAGCTGGATGCTTCGTTCAGCCCTGTGCGTCGGGTTGCTTACGTGGTGGAAAACGCCCGTGTCGAGCAGCGCACCAACCTGGACAAACTGGTTATCGACCTGGAAACCAACGGTACTCTGGACCCTGAAGAGGCTATTCGTCGTGCCGCGACCATCCTGCAGCAGCAGCTGGCCGCGTTCGTCGACCTCAAAGGTGACAGTGAGCCAGTGGTGGTCGAGCAGGAAGACGAGATCGATCCGATCCTGCTGCGTCCTGTCGATGACCTGGAACTGACCGTACGTTCGGCCAACTGCCTCAAGGCAGAGAACATCTACTACATCGGTGATCTGATTCAGCGCACTGAAGTAGAGCTGCTCAAAACCCCGAACCTGGGCAAGAAATCCCTGACCGAAATCAAGGATGTTCTGGCTTCTCGCGGTCTGTCCCTCGGTATGCGCCTCGACAACTGGCCGCCGGCAAGTAGCCATCGTCGGCAAGCTGTTCAACGATCTGGGCAAGCGCTACGCCACCCGTAA
PROTEIN sequence
Length: 292
MPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGPGVVTAADIQLDHDVEIVNGDHVIANLASNGALNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPVVVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASSHRRQAVQRSGQALRHP*