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08E140C01_10kDa_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_15_1
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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192..1178
-----------------
DNA (987bp)
protein (329aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HA47_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERS06953.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
putative transposase
08E140C01_10kDa_scaffold_15_2

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1373..1900
-----------------
DNA (528bp)
protein (176aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Pseudomonas pelagia RepID=UPI0003A4E443 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_15_3

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1928..2533
-----------------
DNA (606bp)
protein (202aa)
Holliday junction DNA helicase RuvA n=1 Tax=Pseudomonas pelagia RepID=UPI000399B450 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09746.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ruvA; Holliday junction DNA helicase RuvA
08E140C01_10kDa_scaffold_15_4

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2561..3622
-----------------
DNA (1062bp)
protein (354aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction DNA helicase RuvB n=1 Tax=Pseudomonas pelagia RepID=UPI0003A93141 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09747.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_15_5

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3684..4118
-----------------
DNA (435bp)
protein (145aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A5D3A9
Uncharacterized protein {ECO:0000313|EMBL:KKO09748.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_10kDa_scaffold_15_6

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4141..4827
-----------------
DNA (687bp)
protein (229aa)
protein tolQ n=1 Tax=Pseudomonas pelagia RepID=UPI0003B78FC6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein TolQ
08E140C01_10kDa_scaffold_15_7

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4840..5286
-----------------
DNA (447bp)
protein (149aa)
biopolymer transporter TolR n=1 Tax=Pseudomonas pelagia RepID=UPI00039A0893
Uncharacterized protein {ECO:0000313|EMBL:KKO09750.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
biopolymer transporter TolR
08E140C01_10kDa_scaffold_15_8

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5283..6269
-----------------
DNA (987bp)
protein (329aa)
cell envelope biogenesis protein TolA n=1 Tax=Pseudomonas pelagia RepID=UPI0003A22473 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09751.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB family protein
08E140C01_10kDa_scaffold_15_9

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6269..7573
-----------------
DNA (1305bp)
protein (435aa)
translocation protein TolB n=1 Tax=Pseudomonas pelagia RepID=UPI0003A06F81 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09752.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translocation protein TolB
08E140C01_10kDa_scaffold_15_10

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7619..8113
-----------------
DNA (495bp)
protein (165aa)
peptidoglycan-binding protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B5C3C2
Uncharacterized protein {ECO:0000313|EMBL:KKO09753.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidoglycan-binding protein
08E140C01_10kDa_scaffold_15_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8122..8916
-----------------
DNA (795bp)
protein (265aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A9AD76 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ19078.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
08E140C01_10kDa_scaffold_15_12

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9093..9752
-----------------
DNA (660bp)
protein (220aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Pseudomonas pelagia RepID=UPI00039BA3E9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09755.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
radical SAM domain-containing protein
08E140C01_10kDa_scaffold_15_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9756..10439
-----------------
DNA (684bp)
protein (228aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A015B8 rbh
hypothetical protein
08E140C01_10kDa_scaffold_15_trna_1
unknown

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10504..10576
-----------------
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_15_14

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10704..11762
-----------------
DNA (1059bp)
protein (353aa)
quinolinate synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8CDE9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97934.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
quinolinate synthetase
08E140C01_10kDa_scaffold_15_15

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comp(11763..13226)
-----------------
DNA (1464bp)
protein (488aa)
Zn-dependent protease (EC:3.4.24.-)
peptidase M48 n=1 Tax=Pseudomonas pelagia RepID=UPI00039A5B46 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09767.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_15_16

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13313..13561
-----------------
DNA (249bp)
protein (83aa)
response regulator SirA n=1 Tax=Pseudomonas pelagia RepID=UPI0003A31874
Uncharacterized protein {ECO:0000313|EMBL:KKN97932.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_10kDa_scaffold_15_17

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13573..14670
-----------------
DNA (1098bp)
protein (366aa)
permease n=1 Tax=Pseudomonas pelagia RepID=UPI0003A97452 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
permase
08E140C01_10kDa_scaffold_15_18
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14671..15141)
-----------------
DNA (471bp)
protein (157aa)
peroxiredoxin n=1 Tax=Pseudomonas pelagia RepID=UPI00039DF08B
Bacterioferritin comigratory protein {ECO:0000313|EMBL:CEA02204.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
bacterioferritin comigratory protein
08E140C01_10kDa_scaffold_15_19
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15153..15710)
-----------------
DNA (558bp)
protein (186aa)
glycine cleavage system protein R n=1 Tax=Pseudomonas pelagia RepID=UPI0003AA1AA9
Glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:CEA02203.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
hypothetical protein
08E140C01_10kDa_scaffold_15_20

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15940..16815
-----------------
DNA (876bp)
protein (292aa)
Dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Pseudomonas pelagia RepID=UPI00039ED300
Uncharacterized protein {ECO:0000313|EMBL:KKO09771.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_15_21
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16851..17957
-----------------
DNA (1107bp)
protein (369aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A74037 rbh
Putative lipoprotein {ECO:0000313|EMBL:CEA02198.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M7
Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor
08E140C01_10kDa_scaffold_15_22

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17975..18784
-----------------
DNA (810bp)
protein (270aa)
beta-lactamase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A32C7D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09773.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metallo-beta-lactamase superfamily domain-containing protein
08E140C01_10kDa_scaffold_15_23
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18784..19497
-----------------
DNA (714bp)
protein (238aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A90A77 rbh
08E140C01_10kDa_scaffold_15_trna_2
unknown

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19544..19630
-----------------
DNA (87bp)
transferRNA
08E140C01_10kDa_scaffold_15_24
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20287..20853)
-----------------
DNA (567bp)
protein (189aa)
resolvase n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002556858
DNA invertase {ECO:0000313|EMBL:KFX67665.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3
hypothetical protein
08E140C01_10kDa_scaffold_15_25
Cronobacter condimenti, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21445..22140
-----------------
DNA (696bp)
protein (232aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI0003805EF3
Uncharacterized protein {ECO:0000313|EMBL:CCJ74428.1}; TaxID=1073999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter c
hypothetical protein
08E140C01_10kDa_scaffold_15_26
unknown

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comp(22278..22928)
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

08E140C01_10kDa_scaffold_15_27
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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comp(23441..24946)
-----------------
DNA (1506bp)
protein (502aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AZ13_PSERE
Phage integrase Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
integrase
08E140C01_10kDa_scaffold_15_28
unknown

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comp(25489..26391)
-----------------
DNA (903bp)
protein (301aa)

This feature has no annotations

Displaying items 1-30 of 292 in total

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