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08E140C01_10kDa_scaffold_9_5

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_58_33_partial

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: 4487..5092

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A4803C similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 200.0
  • Bit_score: 231
  • Evalue 8.90e-58
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:CEA02279.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 197.0
  • Bit_score: 197
  • Evalue 2.00e-47
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 205.0
  • Bit_score: 154
  • Evalue 3.00e-35

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Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGTGAGTCCCTTGAAAAGTCTTCGTTACATACATTTTATTGTTGGCCTGAGCGCATTGGTCATTGGCCTGCTGAATATTCAACCGGCAGCTGCTCAGCTTGCTCCCATCGTCATCATTGCCCTGTTGACCGGCCTGCTGAACCTGCAGCAATTCAATCACAGCAGTCTGAGTGGGGGTGTGGTTCGCCGCAGTCTCGGTATTGTTGCTGCCATCATGCTGCTTTGTGCCGGCTTGATACCCCTCGGCATCCTGATTTTTGCCCAACCTCAACTGATTGGTTATGGCATTCATGCGGTAGCGCTGGCCATTGGCGCCATCTGCCTGCTGACCGTGCTGAACCTGACAGCTATTCTCGGCGGTCTGCAACTGAGCCTCCCCAGCCGCTCACGTCGTCAGTCCGGCCGCGAGACCGGTACGGTAAAGTGGTTCAACTCGCAAAAGGGCTTTGGTTTTATCTCACGGGATCAGGGCGACGATGTATTTGTCCACTTCCGCGCTATTCGCGGTGAGGGGCATCGTGCCCTGACAGAGGGTCAACGGGTCGAGTTCGAGGTCGCCAACCGCGACAAGGGCCTGCAGGCTGAGGACGTGGTTATTCTCTGA
PROTEIN sequence
Length: 202
MVSPLKSLRYIHFIVGLSALVIGLLNIQPAAAQLAPIVIIALLTGLLNLQQFNHSSLSGGVVRRSLGIVAAIMLLCAGLIPLGILIFAQPQLIGYGIHAVALAIGAICLLTVLNLTAILGGLQLSLPSRSRRQSGRETGTVKWFNSQKGFGFISRDQGDDVFVHFRAIRGEGHRALTEGQRVEFEVANRDKGLQAEDVVIL*