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This organism can only be binned in the context of its binning project RIFCSPHIGHO2_01_FULL. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

08E140C01_10kDa_scaffold_11_1

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_58_33_partial

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: comp(210..1157)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pseudomonas pelagia RepID=UPI00039E3DBC similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 315.0
  • Bit_score: 575
  • Evalue 3.00e-161
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN99937.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 315.0
  • Bit_score: 573
  • Evalue 2.10e-160
4-hydroxy-3-methylbut-2-enyl diphosphate reductase similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 314.0
  • Bit_score: 544
  • Evalue 2.10e-152

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 948
ATGCAGATCCAACTGGCTAACCCGCGTGGCTTTTGTGCCGGTGTCGACCGCGCCATCGAGATCGTCAATCGCGCCCTTGAGGTGTTCGGTCCACCGATTTATGTGCGGCATGAAGTGGTGCACAACAAATTTGTGGTCGAGGATCTGCGCAGCCGCGGAGCGGTCTTTGTCGAGGAACTGGATCAGGTGCCGGATGATGTGATTGTCATCTTCAGTGCCCACGGAGTGTCCCAGGCGGTCCGGCAGGAAGCCGATGCGCGTGGCCTCAAGGTCTTTGATGCGACCTGCCCGCTGGTGACCAAGGTGCATATGGAAGTGGCGCGTTACAGCCGTGACGGGCTTGAGTGCATCCTGATTGGCCATGCCGGCCATCCGGAGGTCGAGGGCACCATGGGTCAGTATGATGCCAGCAGGGGCGGCGCCATCTATCTGGTTGAAGATGAAGCCGACGTCGCCCGTTTGCAGATAAACAACCCCCAGCGTTTGGCCTTTGTCACCCAGACCACCTTGTCCATGGATGATACTGCACGGGTTATCGATGCCCTCAGGGCGCGCTTCCCAGCGATCGATGGACCGAGAAAGGACGATATCTGCTATGCCACGCAAAACCGCCAGGACGCTGTCAAACAGCTGGCCAATGGCTGCGACCTGGTGCTAGTGGTCGGCAGCCCCAACAGCTCCAACTCCAATCGCCTGCGCGAGTTGTCAGAGCGCATGGGTACGCCAGCCTATCTGATAGACGGTGCTGATGAGATTGATCCTGCCTGGCTTGAGGGTGTCAGCAATATAGGCATTACCGCCGGTGCCTCCGCACCCGACATTCTGGTACGTCAGGTGATAGAAAGGTTGCATGGCATGGGCGCAACCGGTGCCGAAGAGCTGGCTGGGCAGCCTGAGAACATTGTGTTCAGCATGCCCAAGGAATTGCGGGTGGTAAATTTGGATTAG
PROTEIN sequence
Length: 316
MQIQLANPRGFCAGVDRAIEIVNRALEVFGPPIYVRHEVVHNKFVVEDLRSRGAVFVEELDQVPDDVIVIFSAHGVSQAVRQEADARGLKVFDATCPLVTKVHMEVARYSRDGLECILIGHAGHPEVEGTMGQYDASRGGAIYLVEDEADVARLQINNPQRLAFVTQTTLSMDDTARVIDALRARFPAIDGPRKDDICYATQNRQDAVKQLANGCDLVLVVGSPNSSNSNRLRELSERMGTPAYLIDGADEIDPAWLEGVSNIGITAGASAPDILVRQVIERLHGMGATGAEELAGQPENIVFSMPKELRVVNLD*