ggKbase home page

08E140C01_10kDa_scaffold_11_15

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_58_33_partial

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: 16096..16575

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein FimT n=1 Tax=Pseudomonas pelagia RepID=UPI00039EDB00 similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 159.0
  • Bit_score: 206
  • Evalue 1.90e-50
Tfp pilus assembly protein FimT-like protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 161.0
  • Bit_score: 116
  • Evalue 5.50e-24
Tfp pilus assembly protein FimT-like protein {ECO:0000313|EMBL:AEB57081.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 157.0
  • Bit_score: 116
  • Evalue 2.70e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGCCAAGCGGACGCGAAAAGGGCTTCACCCTGATTGAATTGATGATGGTCTTAGTTCTATTGGCTATCGTAGCCTTTATTGCCGTGCCAAGCTTTGTCGGCCTGATTCGCGACAATCAGGTTCAGGCGCAGGCGGAAGAGTTCAACAGCATGCTGCAATATGCGCGCAGTGAGTCGGTAATTCGCCGCCGAGCAGTCAACGTCGACATCAACGCGGGAACCGGCTTGGTTGATGTTATTGCCAGCGGTGAAACCCTGCGGTCAACAACACTGAATACCAACGGTATCGCGATTACGTCTACCCACCCTCTGCTGTCCTTCCGACCTAACGGCACCTCAACCATCAATGCTTACCGTGCCGTGTTCTGTCGCGACGGTCTGGCTGAAAAGGCCTTTGTGGTAACCGTTGTTGGCAGCGGCCGGGCGACCATGCATCCCCGTGGCCGTGATGAATTTGGCAATGCGCTGGGAGGCTGCTGA
PROTEIN sequence
Length: 160
MPSGREKGFTLIELMMVLVLLAIVAFIAVPSFVGLIRDNQVQAQAEEFNSMLQYARSESVIRRRAVNVDINAGTGLVDVIASGETLRSTTLNTNGIAITSTHPLLSFRPNGTSTINAYRAVFCRDGLAEKAFVVTVVGSGRATMHPRGRDEFGNALGGC*