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08E140C01_10kDa_scaffold_11_21

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_58_33_partial

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: 22881..23405

Top 3 Functional Annotations

Value Algorithm Source
general secretion pathway protein H n=1 Tax=Pseudomonas pelagia RepID=UPI0003A28B17 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 169.0
  • Bit_score: 176
  • Evalue 1.70e-41
Putative type IV pilus-like protein {ECO:0000313|EMBL:CEA02917.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 165.0
  • Bit_score: 165
  • Evalue 5.60e-38
fimT; type IV pilus biogenesis protein, FimT similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 164.0
  • Bit_score: 119
  • Evalue 9.20e-25

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Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGCCACCCCGCTCCGCGGTTTTACCCTGCTCGAACTGCTTGTCACTCTGGGTCTGTTGATCACCCTGATCACCTTTGGCATACCCGCTTTATCCGGACTACTGGAGCGCCAACGGCTGGATAGTGCAGTCGATACGCTTGGTCGCAGTCTTAATCTGGCACGCCAGGAAGCCATATTGCGAAATCAGGTGGTTACCCTGGCGCCGCTGGAAGCCAATTGGACGGGGGATTGGGTAGTATTTATCGACCAGAATCACAATGCCGAACTGGACTCCGAGGAAACCAAACTGCGGCATATCCCTGCCATGCCCAACCTGCGCGTAGTCAGCAATCCACCTGTAAGCAAGTATGTTCGATTCAATGGCCGGGGCGAGACCCAGCTGTTGAATGGCGGGTTTCAGGCTGGGCGTTTTACACTCTGTCCGCGTAATCAGACAGCAGCGGCACGGCACGTGATAATCAACAGTGTCGGGCGATGGCGCATCGAGCAAGGCCAGATTGGCGACCCCGGCTGCCAGCTCTAG
PROTEIN sequence
Length: 175
MATPLRGFTLLELLVTLGLLITLITFGIPALSGLLERQRLDSAVDTLGRSLNLARQEAILRNQVVTLAPLEANWTGDWVVFIDQNHNAELDSEETKLRHIPAMPNLRVVSNPPVSKYVRFNGRGETQLLNGGFQAGRFTLCPRNQTAAARHVIINSVGRWRIEQGQIGDPGCQL*