ggKbase home page

08E140C01_10kDa_scaffold_449_15

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(14796..15752)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CCE24781.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 318.0
  • Bit_score: 615
  • Evalue 4.90e-173
23S rRNA pseudouridylate synthase C n=1 Tax=Methylomicrobium buryatense RepID=UPI000345470B similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 318.0
  • Bit_score: 628
  • Evalue 3.00e-177
  • rbh
rluC; rRNA pseudouridylate synthase C similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 318.0
  • Bit_score: 615
  • Evalue 9.80e-174
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylomicrobium alcaliphilum → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGAAACCAGTACAGCAAGAAACGCATTTCGGCGTTCAATTTATTGAAATATTTGAAGAAAACTGTGATCAGCGGCTTGATAACTTTTTGATTGCCAAGCTGAAAGGCGTGCCTAAAAGTCGGATTTATCGGATTGTTCGAAAGGGTGAAGTGCGCGTCAATAAAGGCCGCGTGGATGTGAAATATCGCTTGAAGGAGGGCGATGTCGTCAGAATTCCGCCAATACGGGTTGCCGAGACCGAAAATGACGCATTTGTGCCGCAATCATTAAAACACAGTCTCGAGCATGATATTTTGTATGAAGACGATGCGCTGTTGGTACTCAATAAGCCGTCCGGCTTTGCCGTGCATGGCGGTAGCGGACTGGATTCGGCAGTCATCGAAGGGCTGAGGCAATTAAGACCTGCAGCACCGTTTCTAGAATTGGTGCACCGTTTGGATAGGGATACTTCCGGTTGTTTATTGATTGCGAAGAAAAGGAGTGCTTTGCGAAAACTACATGAACTGTTTCGTGGCGACGATATTCAAAAAACCTATTTGGCCGTTTTAGCGGGGCGTTGGGCGCGAAAAAAGTTGGTGGTTACAGCCCCGTTGCAAAAAAATGTCAACAAAGGCGGCGAGCGTATGGTCGAAGTGAGTCGTTCGGGAAAAGAAGCCGAAACTTTATTTCGACGCATTAAGTTATTGTCGAATGCGACTTTGGTCGAGGCGTCACCTAAGACCGGACGAACACATCAGATTCGTGTTCACGCCGCCTGGCTAGGCCATCCCATCATCGGCGACGAGCGTTATGGAGATTTCGAGGTTAATAAGGCCTTCAAAAAAATCGGTTTTAAGCGAATGTTTTTGCACGCTTACCGATTGGAATTCGTCCATCCCGTTACCGGGCAGCGATTGCAGATTACCGCGCCTGTACCGAAGTCAATGGAAGCATTAATTAACGAGAATAATGAGTAA
PROTEIN sequence
Length: 319
MKPVQQETHFGVQFIEIFEENCDQRLDNFLIAKLKGVPKSRIYRIVRKGEVRVNKGRVDVKYRLKEGDVVRIPPIRVAETENDAFVPQSLKHSLEHDILYEDDALLVLNKPSGFAVHGGSGLDSAVIEGLRQLRPAAPFLELVHRLDRDTSGCLLIAKKRSALRKLHELFRGDDIQKTYLAVLAGRWARKKLVVTAPLQKNVNKGGERMVEVSRSGKEAETLFRRIKLLSNATLVEASPKTGRTHQIRVHAAWLGHPIIGDERYGDFEVNKAFKKIGFKRMFLHAYRLEFVHPVTGQRLQITAPVPKSMEALINENNE*