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ACD23_225

Alias: ACD23_62106.6371.15

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_225_1

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comp(7..864)
-----------------
DNA (858bp)
protein (286aa)
zonular occludens toxin
seg (db=Seg db_id=seg from=249 to=260)
Zot (db=HMMPfam db_id=PF05707 from=2 to=151 evalue=8.6e-28 interpro_id=IPR008900 interpro_description=Zonular occludens toxin)
Zonular occludens toxin {ECO:0000313|EMBL:EKD97197.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_2

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comp(864..1181)
-----------------
DNA (318bp)
protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
seg (db=Seg db_id=seg from=3 to=14)
ACD23_225_3

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comp(1185..2675)
-----------------
DNA (1491bp)
protein (497aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=471 to=493)
seg (db=Seg db_id=seg from=344 to=366)
seg (db=Seg db_id=seg from=308 to=320)
ACD23_225_4

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comp(2728..2973)
-----------------
DNA (246bp)
protein (82aa)
seg (db=Seg db_id=seg from=54 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=69)
Uncharacterized protein {ECO:0000313|EMBL:EKD97200.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_5

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comp(3037..3174)
-----------------
DNA (138bp)
protein (46aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD97201.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_6

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comp(3171..3269)
-----------------
DNA (99bp)
protein (33aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=13 to=23)
Uncharacterized protein {ECO:0000313|EMBL:EKD97202.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_7

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comp(3605..4321)
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IWP2_COMT2 (db=UNIREF evalue=6.0e-91 bit_score=337.0 identity=68.8 coverage=94.5606694560669)
Uncharacterized protein {ECO:0000313|EMBL:EKD97196.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_8

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comp(4691..4846)
-----------------
DNA (156bp)
protein (52aa)
4691..4846 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD97190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_9

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comp(4843..5058)
-----------------
DNA (216bp)
protein (72aa)
4843..5058 - (rbs_motif=GGAGG rbs_spacer=3-4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD97191.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_10

Not on your lists

comp(5055..5249)
-----------------
DNA (195bp)
protein (65aa)
seg (db=Seg db_id=seg from=6 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKD97192.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_225_11

Not on your lists

comp(5254..5556)
-----------------
DNA (303bp)
protein (101aa)
Helix-destabilizing protein {ECO:0000313|EMBL:EKD97193.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Helix-destabilising protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U9L8_9BURK
ACD23_225_12

Not on your lists

5624..6019
-----------------
DNA (396bp)
protein (132aa)
seg (db=Seg db_id=seg from=58 to=71)
HTH_3 (db=HMMPfam db_id=PF01381 from=17 to=52 evalue=0.00021 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Uncharacterized protein {ECO:0000313|EMBL:EKD97194.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD23_225_13

Not on your lists

6198..6407
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein
DUF3653 (db=HMMPfam db_id=PF12375 from=10 to=58 evalue=2.0e-13 interpro_id=IPR021077 interpro_description=Bacteriophage phi-Lf, Orf112)
Uncharacterized protein {ECO:0000313|EMBL:EKD97195.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJI7_ACIET
Displaying 13 items

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