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ACD23_508

Alias: ACD23_90222.4186.7

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_508_1

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1..873
-----------------
DNA (873bp)
protein (291aa)
infB; translation initiation factor 2
infB; translation initiation factor 2
Translation initiation factor IF-2 n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X849_METSD (db=UNIREF evalue=8.0e-129 bit_score=463.0 identity=82.07 coverage=99.3127147766323)
seg (db=Seg db_id=seg from=66 to=75)
ACD23_508_2

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888..1268
-----------------
DNA (381bp)
protein (127aa)
rbfA; ribosome-binding factor A
Ribosome-binding factor A n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=RBFA_NITMU (db=UNIREF evalue=1.0e-36 bit_score=155.0 identity=57.26 coverage=96.8503937007874)
RBFA (db=PatternScan db_id=PS01319 from=76 to=97 evalue=0.0 interpro_id=IPR020053 interpro_description=Ribosome-binding factor A, conserved site GO=Biological Process: rRNA processing (GO:0006364))
rbfA: ribosome-binding factor A (db=HMMTigr db_id=TIGR00082 from=1 to=116 evalue=1.4e-42 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
ACD23_508_3

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1265..2200
-----------------
DNA (936bp)
protein (312aa)
tRNA pseudouridine synthase B
tRNA pseudouridine synthase B
UPI0001D58F51 related cluster n=1 Tax=unknown RepID=UPI0001D58F51 (db=UNIREF evalue=2.0e-106 bit_score=389.0 identity=61.46 coverage=96.1538461538462)
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=13 to=221 evalue=2.3e-104 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD23_508_4

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comp(2219..2488)
-----------------
DNA (270bp)
protein (90aa)
ankyrin
Ankyrin n=1 Tax=Gallionella capsiferriformans ES-2 RepID=C5V301_9PROT (db=UNIREF evalue=2.0e-09 bit_score=64.7 identity=41.43 coverage=73.3333333333333)
Ankyrin {ECO:0000313|EMBL:EKD96715.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_508_5

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comp(2551..3159)
-----------------
DNA (609bp)
protein (203aa)
nitroreductase
seg (db=Seg db_id=seg from=171 to=186)
FMN-dependent nitroreductase-like (db=superfamily db_id=SSF55469 from=10 to=195 evalue=1.4e-45 interpro_id=IPR000415 interpro_description=Nitroreductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
no description (db=Gene3D db_id=G3DSA:3.40.109.10 from=11 to=166 evalue=4.7e-44)
ACD23_508_6

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comp(3220..3918)
-----------------
DNA (699bp)
protein (233aa)
pirin family protein
seg (db=Seg db_id=seg from=133 to=149)
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=232 evalue=2.2e-79 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Pirin (db=HMMPIR db_id=PIRSF006232 from=1 to=232 evalue=1.8e-64 interpro_id=IPR012093 interpro_description=Pirin)
ACD23_508_7

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4108..4218
-----------------
DNA (111bp)
protein (37aa)
glutamyl-Q tRNA(Asp) synthetase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase n=4 Tax=Shewanella baltica RepID=A3D8A5_SHEB5 (db=UNIREF evalue=1.0e-09 bit_score=65.5 identity=75.68 coverage=97.2972972972973)
Uncharacterized protein {ECO:0000313|EMBL:EKD96718.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
frag Jill Banfield (11/15/12)
Displaying 7 items

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